From 6cf40804c47c573c965aadbff3f4b4e55d6285ba Mon Sep 17 00:00:00 2001
From: Jos van Nijnatten <spam@euphemism-inc.nl>
Date: Mon, 15 Feb 2021 17:03:34 +0100
Subject: [PATCH] adapter comments

---
 rnaseq/step2_trim/snippet.sh | 5 +++++
 1 file changed, 5 insertions(+)

diff --git a/rnaseq/step2_trim/snippet.sh b/rnaseq/step2_trim/snippet.sh
index ebf0200..1ae866f 100644
--- a/rnaseq/step2_trim/snippet.sh
+++ b/rnaseq/step2_trim/snippet.sh
@@ -6,6 +6,11 @@
 module load Trimmomatic
 
 
+# Adapters can be found at
+# https://github.com/timflutre/trimmomatic/tree/master/adapters
+# But should be verified with FastQC, or in another way.
+
+
 # (Example) Paired end
 java -jar $EBROOTTRIMMOMATIC/trimmomatic.jar PE \
   -phred33 \