added molgenis production chart

molgenis-preview/README.md

@@ -1,5 +1,5 @@
 # MOLGENIS preview
-Is used for integration testing purposes.
+This chart is used for testing purposes. It can be used by data managers or developers to test MOLGENIS (e.g. integration testing).
 
 ## Containers
 This chart spins up a complete stack to run MOLGENIS. The created containers are:
@@ -9,3 +9,8 @@ This chart spins up a complete stack to run MOLGENIS. The created containers are
 - Elasticsearch
 - OpenCPU
 
+## Rancher
+You can spin up a test instance by navigating to https://rancher.molgenis.org:7777 and login with your LDAP-account.
+
+Go to the test-environment and click on "Launch". Search for MOLGENIS.
+

molgenis-preview/test.yaml

@@ -1,120 +0,0 @@
-# Source: molgenis/templates/deployment.yaml
-apiVersion: apps/v1beta2
-kind: Deployment
-metadata:
-  name: lanky-ragdoll-molgenis
-  labels:
-    app: molgenis
-    chart: molgenis-0.1.0
-    release: lanky-ragdoll
-    heritage: Tiller
-spec:
-  replicas: 1
-  selector:
-    matchLabels:
-      app: molgenis
-      release: lanky-ragdoll
-  template:
-    metadata:
-      labels:
-        app: molgenis
-        release: lanky-ragdoll
-    spec:
-      containers:
-        - name: molgenis
-          image: "registry.molgenis.org/molgenis/molgenis-app:latest"
-          imagePullPolicy: Always
-          env:
-            - name: molgenis.home
-              value: /home/molgenis
-            - name: opencpu.uri.host
-              value: opencpu
-            - name: elasticsearch.transport.addresses
-              value: elasticsearch:9300
-            - name: elasticsearch.cluster.name
-              value: molgenis
-            - name: db_uri
-              value: "jdbc:postgresql://postgres/molgenis"
-            - name: db_user
-              value: molgenis
-            - name: db_password
-              value: molgenis
-            - name: admin.password
-              value: admin
-            - name: CATALINA_OPTS
-              value: "-Xmx1g -XX:+UseConcMarkSweepGC -XX:+CMSClassUnloadingEnabled"
-          ports:
-            - containerPort: 8080
-          livenessProbe:
-            httpGet:
-              path: /
-              port: http
-          readinessProbe:
-            httpGet:
-              path: /api/v2/version
-              port: http
-          resources:
-            limits:
-              cpu: 1
-              memory: 1250Mi
-            requests:
-              cpu: 200m
-              memory: 1Gi
-
-
-        - name: elasticsearch
-          image: "docker.elastic.co/elasticsearch/elasticsearch:5.5.3"
-          imagePullPolicy: IfNotPresent
-          env:
-            - name: cluster.name
-              value: molgenis
-            - name: bootstrap.memory_lock
-              value: true
-            - name: ES_JAVA_OPTS
-              value: "-Xms512m -Xmx512m"
-            - name: xpack.security.enabled
-              value: false
-            - name: discovery.type
-              value: single-node
-          ports:
-            - containerPort: 9200
-            - containerPort: 9300
-            limits:
-              cpu: 1
-              memory: 1500Mi
-            requests:
-              cpu: 100m
-              memory: 1Gi
-
-
-        - name: postgres
-          image: "postgres:9.6-alpine"
-          imagePullPolicy: IfNotPresent
-          env:
-            - name: POSTGRES_USER
-              value: molgenis
-            - name: POSTGRES_PASSWORD
-              value: molgenis
-            - name: POSTGRES_DB
-              value: molgenis
-          ports:
-            - containerPort: 5432
-            limits:
-              cpu: 1
-              memory: 250Mi
-            requests:
-              cpu: 100m
-              memory: 250Mi
-
-
-        - name: opencpu
-          image: "molgenis/opencpu:latest"
-          imagePullPolicy: Always
-          ports:
-            - containerPort: 8004
-            limits:
-              cpu: 1
-              memory: 512Mi
-            requests:
-              cpu: 100m
-              memory: 256Mi