diff --git a/molgenis-jenkins/templates/config.tpl b/molgenis-jenkins/templates/config.tpl
index e69de29..998a71d 100644
--- a/molgenis-jenkins/templates/config.tpl
+++ b/molgenis-jenkins/templates/config.tpl
@@ -0,0 +1,260 @@
+{{- define "override_config_map" }}
+apiVersion: v1
+kind: ConfigMap
+metadata:
+ name: {{ template "jenkins.fullname" . }}
+data:
+ config.xml: |-
+
+
+
+ {{ .Values.Master.ImageTag }}
+ 0
+ NORMAL
+ {{ .Values.Master.UseSecurity }}
+
+ true
+
+
+ false
+
+ ${JENKINS_HOME}/workspace/${ITEM_FULLNAME}
+ ${ITEM_ROOTDIR}/builds
+
+
+
+
+
+
+ kubernetes
+
+{{- if .Values.Agent.Enabled }}
+
+
+ default
+ 2147483647
+ 0
+
+
+ {{- $local := dict "first" true }}
+ {{- range $key, $value := .Values.Agent.NodeSelector }}
+ {{- if not $local.first }},{{- end }}
+ {{- $key }}={{ $value }}
+ {{- $_ := set $local "first" false }}
+ {{- end }}
+ NORMAL
+
+{{- range $index, $volume := .Values.Agent.volumes }}
+
+{{- range $key, $value := $volume }}{{- if not (eq $key "type") }}
+ <{{ $key }}>{{ $value }}{{ $key }}>
+{{- end }}{{- end }}
+
+{{- end }}
+
+
+
+ jnlp
+ {{ .Values.Agent.Image }}:{{ .Values.Agent.ImageTag }}
+{{- if .Values.Agent.Privileged }}
+ true
+{{- else }}
+ false
+{{- end }}
+ {{ .Values.Agent.AlwaysPullImage }}
+ /home/jenkins
+
+ ${computer.jnlpmac} ${computer.name}
+ false
+ {{.Values.Agent.Cpu}}
+ {{.Values.Agent.Memory}}
+ {{.Values.Agent.Cpu}}
+ {{.Values.Agent.Memory}}
+
+
+ JENKINS_URL
+ http://{{ template "jenkins.fullname" . }}:{{.Values.Master.ServicePort}}{{ default "" .Values.Master.JenkinsUriPrefix }}
+
+
+
+
+
+
+{{- if .Values.Agent.ImagePullSecret }}
+
+
+ {{ .Values.Agent.ImagePullSecret }}
+
+
+{{- else }}
+
+{{- end }}
+
+
+
+
+
+
+ false
+ false
+ false
+ 2147483647
+ 100
+ 0
+ 0
+
+
+ EXCLUSIVE
+ false
+
+ false
+
+
+
+ /var/run/docker.sock
+ /var/run/docker.sock
+
+
+
+
+ maven
+ webhost12.service.rug.nl/molgenis/molgenis-maven:latest
+ false
+ true
+ /home/jenkins
+ /bin/sh -c
+ cat
+ true
+
+
+
+
+
+
+
+
+ 0
+ 0
+ 0
+ 0
+ 0
+
+
+
+
+
+
+
+
+{{- end -}}
+
+ https://kubernetes.default
+ false
+ {{ .Release.Namespace }}
+ http://{{ template "jenkins.fullname" . }}:{{.Values.Master.ServicePort}}{{ default "" .Values.Master.JenkinsUriPrefix }}
+ {{ template "jenkins.fullname" . }}-agent:50000
+ 10
+ 5
+ 0
+ 0
+
+
+ 5
+ 0
+
+
+
+ All
+ false
+ false
+
+
+
+ All
+ 50000
+
+{{- range .Values.Master.DisabledAgentProtocols }}
+ {{ . }}
+{{- end }}
+
+
+{{- if .Values.Master.CSRF.DefaultCrumbIssuer.Enabled }}
+
+{{- if .Values.Master.CSRF.DefaultCrumbIssuer.ProxyCompatability }}
+ true
+{{- end }}
+
+{{- end }}
+
+
+ true
+
+{{- if .Values.Master.ScriptApproval }}
+ scriptapproval.xml: |-
+
+
+
+
+{{- range $key, $val := .Values.Master.ScriptApproval }}
+ {{ $val }}
+{{- end }}
+
+
+
+
+
+
+
+{{- end }}
+ jenkins.CLI.xml: |-
+
+
+{{- if .Values.Master.CLI }}
+ true
+{{- else }}
+ false
+{{- end }}
+
+ apply_config.sh: |-
+ mkdir -p /usr/share/jenkins/ref/secrets/;
+ echo "false" > /usr/share/jenkins/ref/secrets/slave-to-master-security-kill-switch;
+ cp -n /var/jenkins_config/config.xml /var/jenkins_home;
+ cp -n /var/jenkins_config/jenkins.CLI.xml /var/jenkins_home;
+{{- if .Values.Master.InstallPlugins }}
+ # Install missing plugins
+ cp /var/jenkins_config/plugins.txt /var/jenkins_home;
+ rm -rf /usr/share/jenkins/ref/plugins/*.lock
+ /usr/local/bin/install-plugins.sh `echo $(cat /var/jenkins_home/plugins.txt)`;
+ # Copy plugins to shared volume
+ cp -n /usr/share/jenkins/ref/plugins/* /var/jenkins_plugins;
+{{- end }}
+{{- if .Values.Master.ScriptApproval }}
+ cp -n /var/jenkins_config/scriptapproval.xml /var/jenkins_home/scriptApproval.xml;
+{{- end }}
+{{- if .Values.Master.InitScripts }}
+ mkdir -p /var/jenkins_home/init.groovy.d/;
+ cp -n /var/jenkins_config/*.groovy /var/jenkins_home/init.groovy.d/
+{{- end }}
+{{- if .Values.Master.CredentialsXmlSecret }}
+ cp -n /var/jenkins_credentials/credentials.xml /var/jenkins_home;
+{{- end }}
+{{- if .Values.Master.SecretsFilesSecret }}
+ cp -n /var/jenkins_secrets/* /usr/share/jenkins/ref/secrets;
+{{- end }}
+{{- if .Values.Master.Jobs }}
+ for job in $(ls /var/jenkins_jobs); do
+ mkdir -p /var/jenkins_home/jobs/$job
+ cp -n /var/jenkins_jobs/$job /var/jenkins_home/jobs/$job/config.xml
+ done
+{{- end }}
+{{- range $key, $val := .Values.Master.InitScripts }}
+ init{{ $key }}.groovy: |-
+{{ $val | indent 4 }}
+{{- end }}
+ plugins.txt: |-
+{{- if .Values.Master.InstallPlugins }}
+{{- range $index, $val := .Values.Master.InstallPlugins }}
+{{ $val | indent 4 }}
+{{- end }}
+{{- end }}
+{{- end }}
\ No newline at end of file
diff --git a/molgenis-jenkins/values.yaml b/molgenis-jenkins/values.yaml
index cd770cc..02af41a 100644
--- a/molgenis-jenkins/values.yaml
+++ b/molgenis-jenkins/values.yaml
@@ -67,6 +67,6 @@ jenkins:
# useful to manage encryption keys used for credentials.xml for instance (such as
# master.key and hudson.util.Secret)
# SecretsFilesSecret: jenkins-secrets
- CustomConfigMap: false
+ CustomConfigMap: true
rbac:
install: true
\ No newline at end of file