molgenis-jenkins/templates/molgenis-jenkins-gogs-secret.yaml

@@ -1,16 +0,0 @@
-apiVersion: v1
-kind: Secret
-metadata:
-# this is the jenkins id.
-  name: "molgenis-jenkins-gogs-secret"
-  labels:
-# so we know what type it is.
-    "jenkins.io/credentials-type": "usernamePassword"
-  annotations: {
-# description - can not be a label as spaces are not allowed
-    "jenkins.io/credentials-description" : "user to authenticate against GOGS (git.webhosting.rug.nl)"
-  }
-type: Opaque
-data:
-  username: {{ "p281392" | b64enc | quote }}
-  password: {{ .Values.PipelineSecrets.Env.GogsToken | b64enc | quote }}

molgenis-jenkins/values.yaml

@@ -74,111 +74,6 @@ jenkins:
           </projectFactories>
           <buildStrategies/>
         </jenkins.branch.OrganizationFolder>
-      molgenis-operations: |-
-        <?xml version='1.1' encoding='UTF-8'?>
-        <org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject plugin="workflow-multibranch@2.19">
-          <actions/>
-          <description>HTTPD server that can be used for redirection and proxieing</description>
-          <displayName>molgenis-ops-docker-httpd</displayName>
-          <properties>
-            <org.jenkinsci.plugins.pipeline.modeldefinition.config.FolderConfig plugin="pipeline-model-definition@1.3.1">
-              <dockerLabel></dockerLabel>
-              <registry plugin="docker-commons@1.13"/>
-            </org.jenkinsci.plugins.pipeline.modeldefinition.config.FolderConfig>
-          </properties>
-          <folderViews class="jenkins.branch.MultiBranchProjectViewHolder" plugin="branch-api@2.0.20">
-            <owner class="org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject" reference="../.."/>
-          </folderViews>
-          <healthMetrics>
-            <com.cloudbees.hudson.plugins.folder.health.WorstChildHealthMetric plugin="cloudbees-folder@6.5.1">
-              <nonRecursive>false</nonRecursive>
-            </com.cloudbees.hudson.plugins.folder.health.WorstChildHealthMetric>
-          </healthMetrics>
-          <icon class="jenkins.branch.MetadataActionFolderIcon" plugin="branch-api@2.0.20">
-            <owner class="org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject" reference="../.."/>
-          </icon>
-          <orphanedItemStrategy class="com.cloudbees.hudson.plugins.folder.computed.DefaultOrphanedItemStrategy" plugin="cloudbees-folder@6.5.1">
-            <pruneDeadBranches>true</pruneDeadBranches>
-            <daysToKeep>-1</daysToKeep>
-            <numToKeep>-1</numToKeep>
-          </orphanedItemStrategy>
-          <triggers/>
-          <disabled>false</disabled>
-          <sources class="jenkins.branch.MultiBranchProject$BranchSourceList" plugin="branch-api@2.0.20">
-            <data>
-              <jenkins.branch.BranchSource>
-                <source class="jenkins.plugins.git.GitSCMSource" plugin="git@3.9.1">
-                  <id>a756941d-6c9d-4492-bcf9-327041764be6</id>
-                  <remote>https://git.webhosting.rug.nl/molgenis/molgenis-ops-docker-httpd.git</remote>
-                  <credentialsId>molgenis-jenkins-github-secret</credentialsId>
-                  <traits>
-                    <jenkins.plugins.git.traits.BranchDiscoveryTrait/>
-                  </traits>
-                </source>
-                <strategy class="jenkins.branch.DefaultBranchPropertyStrategy">
-                  <properties class="empty-list"/>
-                </strategy>
-              </jenkins.branch.BranchSource>
-            </data>
-            <owner class="org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject" reference="../.."/>
-          </sources>
-          <factory class="org.jenkinsci.plugins.workflow.multibranch.WorkflowBranchProjectFactory">
-            <owner class="org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject" reference="../.."/>
-            <scriptPath>Jenkinsfile</scriptPath>
-          </factory>
-        </org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject>
-      molgenis-ops-docker-maven: |-
-        <?xml version='1.1' encoding='UTF-8'?>
-        <org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject plugin="workflow-multibranch@2.19">
-          <actions/>
-          <description></description>
-          <properties>
-            <org.jenkinsci.plugins.pipeline.modeldefinition.config.FolderConfig plugin="pipeline-model-definition@1.3.1">
-              <dockerLabel></dockerLabel>
-              <registry plugin="docker-commons@1.13"/>
-            </org.jenkinsci.plugins.pipeline.modeldefinition.config.FolderConfig>
-          </properties>
-          <folderViews class="jenkins.branch.MultiBranchProjectViewHolder" plugin="branch-api@2.0.20">
-            <owner class="org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject" reference="../.."/>
-          </folderViews>
-          <healthMetrics>
-            <com.cloudbees.hudson.plugins.folder.health.WorstChildHealthMetric plugin="cloudbees-folder@6.5.1">
-              <nonRecursive>false</nonRecursive>
-            </com.cloudbees.hudson.plugins.folder.health.WorstChildHealthMetric>
-          </healthMetrics>
-          <icon class="jenkins.branch.MetadataActionFolderIcon" plugin="branch-api@2.0.20">
-            <owner class="org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject" reference="../.."/>
-          </icon>
-          <orphanedItemStrategy class="com.cloudbees.hudson.plugins.folder.computed.DefaultOrphanedItemStrategy" plugin="cloudbees-folder@6.5.1">
-            <pruneDeadBranches>true</pruneDeadBranches>
-            <daysToKeep>-1</daysToKeep>
-            <numToKeep>-1</numToKeep>
-          </orphanedItemStrategy>
-          <triggers/>
-          <disabled>false</disabled>
-          <sources class="jenkins.branch.MultiBranchProject$BranchSourceList" plugin="branch-api@2.0.20">
-            <data>
-              <jenkins.branch.BranchSource>
-                <source class="jenkins.plugins.git.GitSCMSource" plugin="git@3.9.1">
-                  <id>4702479a-6988-4a85-b4b7-e77fa2d05ffa</id>
-                  <remote>https://git.webhosting.rug.nl/molgenis/molgenis=ops-docker-maven.git</remote>
-                  <credentialsId></credentialsId>
-                  <traits>
-                    <jenkins.plugins.git.traits.BranchDiscoveryTrait/>
-                  </traits>
-                </source>
-                <strategy class="jenkins.branch.DefaultBranchPropertyStrategy">
-                  <properties class="empty-list"/>
-                </strategy>
-              </jenkins.branch.BranchSource>
-            </data>
-            <owner class="org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject" reference="../.."/>
-          </sources>
-          <factory class="org.jenkinsci.plugins.workflow.multibranch.WorkflowBranchProjectFactory">
-            <owner class="org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject" reference="../.."/>
-            <scriptPath>Jenkinsfile</scriptPath>
-          </factory>
-        </org.jenkinsci.plugins.workflow.multibranch.WorkflowMultiBranchProject>
     # Kubernetes secret that contains a 'credentials.xml' for Jenkins
     # CredentialsXmlSecret: jenkins-credentials
     # Kubernetes secret that contains files to be put in the Jenkins 'secrets' directory,
@@ -264,8 +159,6 @@ PipelineSecrets:
     CodecovToken: xxxx
     # Token for github bot account
     GitHubToken: xxxx
-    # Token for github bot account
-    GogsToken: xxxx
     # Token for sonarcloud.io
     SonarToken: xxxx
   File:

molgenis-nexus/README.md

@@ -11,18 +11,6 @@ This chart will deploy:
 
 ## Installing the Chart
 
-You can test in install the chart by executing:
+etc.
-
-```helm lint .```
-
-To test if your helm chart-syntax is right and:
-
-```helm install . --dry-run --debug```
-
-To test if your hem chart works and:
-
-```helm install .```
-
-To deploy it on the cluster.