jenkins:
Master:
HostName: jenkins.molgenis.org
ServiceType: ClusterIP
InstallPlugins:
- kubernetes:1.8.4
- workflow-aggregator:2.5
- workflow-job:2.21
- credentials-binding:1.16
- git:3.9.1
- github-branch-source:2.3.6
- kubernetes-credentials-provider:0.9
- blueocean:1.6.2
- github-oauth:0.29
Security:
UseGitHub: false
GitHub:
ClientID: ""
ClienSecret: ""
Jobs: |-
molgenis: |-
.*
false
true
-1
-1
H H * * *
86400000
false
molgenis
molgenis-jenkins-github-secret
1
1
1
Jenkinsfile
molgenis-operations: |-
HTTPD server that can be used for redirection and proxieing
molgenis-ops-docker-httpd
false
true
-1
-1
false
Jenkinsfile
molgenis-ops-docker-maven: |-
false
true
-1
-1
false
Jenkinsfile
# Kubernetes secret that contains a 'credentials.xml' for Jenkins
# CredentialsXmlSecret: jenkins-credentials
# Kubernetes secret that contains files to be put in the Jenkins 'secrets' directory,
# useful to manage encryption keys used for credentials.xml for instance (such as
# master.key and hudson.util.Secret)
# SecretsFilesSecret: jenkins-secrets
CustomConfigMap: true
rbac:
install: true
Pods:
molgenis:
Label: molgenis
NodeUsageMode: NORMAL
volumes:
- type: HostPath
hostPath: "/var/run/docker.sock"
mountPath: "/var/run/docker.sock"
- type: Secret
secretName: molgenis-pipeline-file-secret
mountPath: "/root/.m2"
Containers:
maven:
Image: "registry.webhosting.rug.nl/molgenis/maven"
Command: cat
TTY: true
resources:
requests:
cpu: "1"
memory: "4Gi"
alpine:
Image: "spotify/alpine"
Command: cat
TTY: true
node:
Image: "node"
ImageTag: "9.11.2"
Command: cat
TTY: true
EnvVars:
- type: Secret
key: PGP_PASSPHRASE
secretName: molgenis-pipeline-env-secret
secretKey: pgpPassphrase
- type: KeyValue
key: PGP_SECRETKEY
value: "keyfile:/root/.m2/key.asc"
- type: KeyValue
key: npm_config_registry
value: "http://nexus.molgenis-nexus:8081/repository/npm-central/"
- type: Secret
key: SONAR_TOKEN
secretName: molgenis-pipeline-env-secret
secretKey: sonarToken
- type: Secret
key: CODECOV_TOKEN
secretName: molgenis-pipeline-env-secret
secretKey: codecovToken
- type: Secret
key: GITHUB_TOKEN
secretName: molgenis-pipeline-env-secret
secretKey: githubToken
NodeSelector: {}
molgenis-it:
InheritFrom: molgenis
Label: molgenis-it
NodeUsageMode: EXCLUSIVE
Containers:
elasticsearch:
Image: docker.elastic.co/elasticsearch/elasticsearch
ImageTag: 5.5.3
resources:
requests:
cpu: "100m"
memory: "1Gi"
limits:
cpu: "1"
memory: "1500Mi"
EnvVars:
- type: KeyValue
key: ES_JAVA_OPTS
value: "-Xms512m -Xmx512m"
- type: KeyValue
key: cluster.name
value: molgenis
- type: KeyValue
key: bootstrap.memory_lock
value: "true"
- type: KeyValue
key: xpack.security.enabled
value: "false"
- type: KeyValue
key: discovery.type
value: single-node
postgres:
Image: postgres
ImageTag: 9.6-alpine
resources:
requests:
cpu: "100m"
memory: "250Mi"
limits:
cpu: "1"
memory: "250Mi"
EnvVars:
- type: KeyValue
key: POSTGRES_USER
value: molgenis
- type: KeyValue
key: POSTGRES_PASSWORD
value: molgenis
- type: KeyValue
key: POSTGRES_DB
value: molgenis
opencpu:
Image: molgenis/opencpu
AlwaysPullImage: true
resources:
requests:
cpu: "100m"
memory: "256Mi"
limits:
cpu: "1"
memory: "512Mi"
NodeSelector: {}
PipelineSecrets:
Env:
# Set to false to keep existing secret
Replace: true
# Passphrase for the pgp private key file, prefixed with literal:
PGPPassphrase: literal:xxxx
# Token for codecov.io service
CodecovToken: xxxx
# Token for github bot account
GitHubToken: xxxx
# Token for github bot account
GogsToken: xxxx
# Token for sonarcloud.io
SonarToken: xxxx
# Password Local NEXUS
NexusPassword: xxxx
# Password hub.docker.com
DockerHubPassword: xxxx
File:
# Set to false to keep existing secret
Replace: true
# PGP Private key in ascii format used to sign artifacts
PGPPrivateKeyAsc: |-
-----BEGIN PGP PRIVATE KEY BLOCK-----
xxxxx
-----END PGP PRIVATE KEY BLOCK-----
# maven.settings file
MavenSettingsXML: |-
${user.home}/.mvnrepository
false
nexus
external:*
http://nexus.molgenis-nexus:8081/repository/maven-central/
sonatype-nexus-staging
molgenis
xxxx
local-nexus
http://nexus.molgenis-nexus:8081/repository/maven-snapshots/
admin
xxxxx
registry.molgenis.org
admin
xxxx