107 lines
3.3 KiB
YAML
107 lines
3.3 KiB
YAML
apiVersion: apps/v1beta2
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kind: Deployment
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metadata:
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{{- with .Values.ingress.annotations }}
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annotations:
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{{ toYaml . | indent 4 }}
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{{- end }}
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name: {{ template "molgenis.fullname" . }}
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labels:
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app: {{ template "molgenis.name" . }}
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chart: {{ template "molgenis.chart" . }}
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release: {{ .Release.Name }}
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heritage: {{ .Release.Service }}
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spec:
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replicas: {{ .Values.replicaCount }}
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selector:
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matchLabels:
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app: {{ template "molgenis.name" . }}
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release: {{ .Release.Name }}
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template:
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metadata:
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labels:
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app: {{ template "molgenis.name" . }}
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release: {{ .Release.Name }}
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spec:
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containers:
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- name: molgenis
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{{- with .Values.molgenis }}
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image: {{ .image.repository }}/{{ .image.name }}:{{ .image.tag }}
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imagePullPolicy: {{ .image.pullPolicy }}
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env:
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- name: molgenis.home
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value: /home/molgenis
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- name: opencpu.uri.host
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value: {{ .services.opencpu.host }}
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- name: elasticsearch.transport.addresses
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value: {{ .services.elasticsearch.transportAddresses }}
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- name: elasticsearch.cluster.name
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value: {{ .services.elasticsearch.clusterName }}
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- name: db_uri
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value: jdbc:postgresql://{{ .services.postgres.host }}/{{ .services.postgres.scheme }}
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- name: db_user
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value: {{ .services.postgres.user }}
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- name: db_password
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value: {{ .services.postgres.password }}
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- name: admin.password
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value: {{ .adminPassword }}
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- name: CATALINA_OPTS
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value: "-Xmx{{ .javaOpts.maxHeapSpace }} -XX:+UseConcMarkSweepGC -XX:+CMSClassUnloadingEnabled"
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ports:
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- containerPort: 8080
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livenessProbe:
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httpGet:
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path: /
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port: 8080
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initialDelaySeconds: 60
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periodSeconds: 5
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failureThreshold: 25
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successThreshold: 1
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readinessProbe:
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httpGet:
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path: /api/v2/version
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port: 8080
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initialDelaySeconds: 120
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periodSeconds: 30
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failureThreshold: 3
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successThreshold: 1
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resources:
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{{ toYaml .resources | indent 12 }}
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{{- end }}
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- name: elasticsearch
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{{- with .Values.elasticsearch }}
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image: "{{ .image.repository }}:{{ .image.tag }}"
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imagePullPolicy: {{ .image.pullPolicy }}
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env:
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- name: cluster.name
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value: {{ .clusterName }}
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- name: bootstrap.memory_lock
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value: "true"
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- name: ES_JAVA_OPTS
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value: "{{ .javaOpts }}"
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- name: xpack.security.enabled
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value: "false"
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- name: discovery.type
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value: single-node
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ports:
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- containerPort: 9200
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- containerPort: 9300
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resources:
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{{ toYaml .resources | indent 12 }}
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{{- end }}
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{{- with .Values.nodeSelector }}
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nodeSelector:
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{{ toYaml . | indent 8 }}
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{{- end }}
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{{- with .Values.affinity }}
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affinity:
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{{ toYaml . | indent 8 }}
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{{- end }}
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{{- with .Values.tolerations }}
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tolerations:
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{{ toYaml . | indent 8 }}
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{{- end }}
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