P278949/FastCAR
1
1
Fork 0
Code Issues Pull Requests Releases Wiki Activity

Changed the DESCRIPTION to include dependencies

Browse Source
This commit is contained in:
Marijn 2020-03-26 10:49:56 +01:00
parent c09281b51b
commit 1233c8a3be
2 changed files with 12 additions and 6 deletions
Show Stats Download Patch File Download Diff File Expand all files Collapse all files

17
DESCRIPTION
View File

@ -1,11 +1,16 @@
Package: FastCAR Package: FastCAR
Type: Package Type: Package
Title: What the Package Does (Title Case) Title: Fast Correction of Ambient RNA
Version: 0.1.0 Version: 0.1.0
Author: Who wrote it Author: Marijn Berg
Maintainer: The package maintainer <yourself@somewhere.net> Maintainer: Marijn Berg <m.berg@umcg.nl>
Description: More about what it does (maybe more than one line) Description: FastCAR is used to correct gene expression of cells in droplet based single cell RNA
Use four spaces when indenting paragraphs within the Description. sequencing data. It corrects for ambient RNA, RNA originating from lysed cells in the cell suspension.
License: What license is it under? License: GPL-3
Encoding: UTF-8 Encoding: UTF-8
LazyData: true LazyData: true
RoxygenNote: 7.1.0.9000
Imports:
Matrix,
Seurat,
qlcMatrix

1
R/FastCAR_Base.R
View File

@ -12,6 +12,7 @@
library(Matrix) library(Matrix)
library(Seurat) library(Seurat)
library(qlcMatrix) library(qlcMatrix)
############################################################################### ###############################################################################
# had to make this function to efficiently modify sparse matrices on a per gene basis # had to make this function to efficiently modify sparse matrices on a per gene basis