# Data set with previously accepted taxonomic names — microorganisms.old • AMR (for R)
A data set containing old (previously valid or accepted) taxonomic names according to the Catalogue of Life. This data set is used internally by as.mo.

# Data set with previously accepted taxonomic names

`microorganisms.old.Rd`

A data set containing old (previously valid or accepted) taxonomic names according to the Catalogue of Life. This data set is used internally by `as.mo`.

    microorganisms.old

## Format

A `data.frame` with 21,342 observations and 4 variables:

`col_id`

  Catalogue of Life ID that was originally given

`col_id_new`

  New Catalogue of Life ID that responds to an entry in the `microorganisms` data set

`fullname`

  Old full taxonomic name of the microorganism

`ref`

  Author(s) and year of concerning scientific publication

## Source

Catalogue of Life: Annual Checklist (public online taxonomic database), http://www.catalogueoflife.org (check included annual version with `catalogue_of_life_version()`).

## Catalogue of Life

This package contains the complete taxonomic tree of almost all microorganisms (~65,000 species) from the authoritative and comprehensive Catalogue of Life (http://www.catalogueoflife.org). The Catalogue of Life is the most comprehensive and authoritative global index of species currently available.

Click here for more information about the included taxa. The Catalogue of Life releases updates annually; check which version was included in this package with `catalogue_of_life_version()`.

## Read more on our website!

On our website https://msberends.gitlab.io/AMR you can find a tutorial about how to conduct AMR analysis, the complete documentation of all functions (which reads a lot easier than here in R) and an example analysis using WHONET data.

## See also

`as.mo` `mo_property` `microorganisms`