P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2024-12-27 10:46:12 +01:00
Code Releases Activity
1ca40e8d67
AMR/data-raw/microorganisms.groups.txt

523 lines
49 KiB
Plaintext
Raw Normal View History

new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"mo_group" "mo" "mo_group_name" "mo_name"
"B_ACNTB_BMNN-C" "B_ACNTB_BMNN" "Acinetobacter baumannii complex" "Acinetobacter baumannii"
"B_ACNTB_BMNN-C" "B_ACNTB_CLCC" "Acinetobacter baumannii complex" "Acinetobacter calcoaceticus"
"B_ACNTB_BMNN-C" "B_ACNTB_DJKS" "Acinetobacter baumannii complex" "Acinetobacter dijkshoorniae"
"B_ACNTB_BMNN-C" "B_ACNTB_NSCM" "Acinetobacter baumannii complex" "Acinetobacter nosocomialis"
"B_ACNTB_BMNN-C" "B_ACNTB_PITT" "Acinetobacter baumannii complex" "Acinetobacter pittii"
"B_ACNTB_BMNN-C" "B_ACNTB_SFRT" "Acinetobacter baumannii complex" "Acinetobacter seifertii"
"B_BCTRD_FRGL-C" "B_BCTRD_FRGL" "Bacteroides fragilis complex" "Bacteroides fragilis"
"B_BCTRD_FRGL-C" "B_BCTRD_OVTS" "Bacteroides fragilis complex" "Bacteroides ovatus"
"B_BCTRD_FRGL-C" "B_BCTRD_THTT" "Bacteroides fragilis complex" "Bacteroides thetaiotaomicron"
"B_BCTRD_FRGL-C" "B_BCTRD_VLGT" "Bacteroides fragilis complex" "Bacteroides vulgatus"
"B_BCTRD_FRGL-C" "B_PRBCT_DSTS" "Bacteroides fragilis complex" "Parabacteroides distasonis"
"B_STRPT_HAEM" "B_STRPT_GRPA" "Beta-haemolytic Streptococcus" "Streptococcus Group A"
"B_STRPT_HAEM" "B_STRPT_ABCG" "Beta-haemolytic Streptococcus" "Streptococcus Group A, B, C, G"
"B_STRPT_HAEM" "B_STRPT_GRPB" "Beta-haemolytic Streptococcus" "Streptococcus Group B"
"B_STRPT_HAEM" "B_STRPT_GRPC" "Beta-haemolytic Streptococcus" "Streptococcus Group C"
"B_STRPT_HAEM" "B_STRPT_GRPD" "Beta-haemolytic Streptococcus" "Streptococcus Group D"
"B_STRPT_HAEM" "B_STRPT_GRPE" "Beta-haemolytic Streptococcus" "Streptococcus Group E"
"B_STRPT_HAEM" "B_STRPT_GRPF" "Beta-haemolytic Streptococcus" "Streptococcus Group F"
"B_STRPT_HAEM" "B_STRPT_GRPG" "Beta-haemolytic Streptococcus" "Streptococcus Group G"
"B_STRPT_HAEM" "B_STRPT_GRPH" "Beta-haemolytic Streptococcus" "Streptococcus Group H"
"B_STRPT_HAEM" "B_STRPT_GRPI" "Beta-haemolytic Streptococcus" "Streptococcus Group I"
"B_STRPT_HAEM" "B_STRPT_GRPJ" "Beta-haemolytic Streptococcus" "Streptococcus Group J"
"B_STRPT_HAEM" "B_STRPT_GRPK" "Beta-haemolytic Streptococcus" "Streptococcus Group K"
"B_STRPT_HAEM" "B_STRPT_GRPL" "Beta-haemolytic Streptococcus" "Streptococcus Group L"
"B_STRPT_HAEM" "B_STRPT_AGLC" "Beta-haemolytic Streptococcus" "Streptococcus agalactiae"
"B_STRPT_HAEM" "B_STRPT_ANGN" "Beta-haemolytic Streptococcus" "Streptococcus anginosus"
"B_STRPT_HAEM" "B_STRPT_ANGN_ANGN" "Beta-haemolytic Streptococcus" "Streptococcus anginosus anginosus"
"B_STRPT_HAEM" "B_STRPT_ANGN_WHLY" "Beta-haemolytic Streptococcus" "Streptococcus anginosus whileyi"
"B_STRPT_HAEM" "B_STRPT_CANS" "Beta-haemolytic Streptococcus" "Streptococcus canis"
"B_STRPT_HAEM" "B_STRPT_DYSG" "Beta-haemolytic Streptococcus" "Streptococcus dysgalactiae"
"B_STRPT_HAEM" "B_STRPT_DYSG_DYSG" "Beta-haemolytic Streptococcus" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_HAEM" "B_STRPT_DYSG_EQSM" "Beta-haemolytic Streptococcus" "Streptococcus dysgalactiae equisimilis"
"B_STRPT_HAEM" "B_STRPT_EQUI" "Beta-haemolytic Streptococcus" "Streptococcus equi"
"B_STRPT_HAEM" "B_STRPT_EQUI_EQUI" "Beta-haemolytic Streptococcus" "Streptococcus equi equi"
"B_STRPT_HAEM" "B_STRPT_EQUI_RMNT" "Beta-haemolytic Streptococcus" "Streptococcus equi ruminatorum"
"B_STRPT_HAEM" "B_STRPT_EQUI_ZPDM" "Beta-haemolytic Streptococcus" "Streptococcus equi zooepidemicus"
"B_STRPT_HAEM" "B_STRPT_HYNT" "Beta-haemolytic Streptococcus" "Streptococcus hyointestinalis"
"B_STRPT_HAEM" "B_STRPT_INFN" "Beta-haemolytic Streptococcus" "Streptococcus infantarius"
"B_STRPT_HAEM" "B_STRPT_INFN_COLI" "Beta-haemolytic Streptococcus" "Streptococcus infantarius coli"
"B_STRPT_HAEM" "B_STRPT_INFN_INFN" "Beta-haemolytic Streptococcus" "Streptococcus infantarius infantarius"
"B_STRPT_HAEM" "B_STRPT_LTTN" "Beta-haemolytic Streptococcus" "Streptococcus lutetiensis"
"B_STRPT_HAEM" "B_STRPT_PRCN" "Beta-haemolytic Streptococcus" "Streptococcus porcinus"
"B_STRPT_HAEM" "B_STRPT_PYGN" "Beta-haemolytic Streptococcus" "Streptococcus pyogenes"
"B_STRPT_HAEM" "B_STRPT_SLVR" "Beta-haemolytic Streptococcus" "Streptococcus salivarius"
"B_STRPT_HAEM" "B_STRPT_SLVR_SLVR" "Beta-haemolytic Streptococcus" "Streptococcus salivarius salivarius"
"B_STRPT_HAEM" "B_STRPT_SLVR_THRM" "Beta-haemolytic Streptococcus" "Streptococcus salivarius thermophilus"
"B_STRPT_HAEM" "B_STRPT_SNGN" "Beta-haemolytic Streptococcus" "Streptococcus sanguinis"
"B_BRKHL_CEPC-C" "B_BRKHL_AMBF" "Burkholderia cepacia complex" "Burkholderia ambifaria"
"B_BRKHL_CEPC-C" "B_BRKHL_ANTH" "Burkholderia cepacia complex" "Burkholderia anthina"
"B_BRKHL_CEPC-C" "B_BRKHL_CNCP" "Burkholderia cepacia complex" "Burkholderia cenocepacia"
"B_BRKHL_CEPC-C" "B_BRKHL_CEPC" "Burkholderia cepacia complex" "Burkholderia cepacia"
"B_BRKHL_CEPC-C" "B_BRKHL_DOLS" "Burkholderia cepacia complex" "Burkholderia dolosa"
"B_BRKHL_CEPC-C" "B_BRKHL_MLTV" "Burkholderia cepacia complex" "Burkholderia multivorans"
"B_BRKHL_CEPC-C" "B_BRKHL_PYRR" "Burkholderia cepacia complex" "Burkholderia pyrrocinia"
"B_BRKHL_CEPC-C" "B_BRKHL_STBL" "Burkholderia cepacia complex" "Burkholderia stabilis"
"B_BRKHL_CEPC-C" "B_BRKHL_UBNN" "Burkholderia cepacia complex" "Burkholderia ubonensis"
"B_BRKHL_CEPC-C" "B_BRKHL_VTNM" "Burkholderia cepacia complex" "Burkholderia vietnamiensis"
"F_CANDD_ALBC-C" "F_CANDD_AFRC" "Candida albicans complex" "Candida africana"
"F_CANDD_ALBC-C" "F_CANDD_ALBC" "Candida albicans complex" "Candida albicans"
MO group fixes
2023-07-12 16:04:48 +02:00
"F_CANDD_ALBC-C" "F_CANDD_ALBC_ALBC" "Candida albicans complex" "Candida albicans albicans"
"F_CANDD_ALBC-C" "F_CANDD_ALBC_CLSS" "Candida albicans complex" "Candida albicans claussenii"
"F_CANDD_ALBC-C" "F_CANDD_ALBC_MTLN" "Candida albicans complex" "Candida albicans metalondinensis"
"F_CANDD_ALBC-C" "F_CANDD_ALBC_NNLQ" "Candida albicans complex" "Candida albicans non-liquefaciens"
"F_CANDD_ALBC-C" "F_CANDD_ALBC_STLL" "Candida albicans complex" "Candida albicans stellatoidea"
"F_CANDD_ALBC-C" "F_CANDD_ALBC_TRPC" "Candida albicans complex" "Candida albicans tropicalis"
"F_CANDD_ALBC-C" "F_CANDD_ALBC_VLLM" "Candida albicans complex" "Candida albicans vuilleminii"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"F_CANDD_ALBC-C" "F_CANDD_DBLN" "Candida albicans complex" "Candida dubliniensis"
"F_CANDD_GLBR-C" "F_CANDD_BRCR" "Candida glabrata complex" "Candida bracarensis"
"F_CANDD_GLBR-C" "F_CANDD_GLBR" "Candida glabrata complex" "Candida glabrata"
"F_CANDD_GLBR-C" "F_CANDD_NVRN" "Candida glabrata complex" "Candida nivariensis"
"F_CANDD_PRPS-C" "F_CANDD_MTPS" "Candida parapsilosis complex" "Candida metapsilosis"
"F_CANDD_PRPS-C" "F_CANDD_ORTH" "Candida parapsilosis complex" "Candida orthopsilosis"
"F_CANDD_PRPS-C" "F_CANDD_PRPS" "Candida parapsilosis complex" "Candida parapsilosis"
MO group fixes
2023-07-12 16:04:48 +02:00
"F_CANDD_PRPS-C" "F_CANDD_PRPS_HOKK" "Candida parapsilosis complex" "Candida parapsilosis hokkaii"
"F_CANDD_PRPS-C" "F_CANDD_PRPS_INTR" "Candida parapsilosis complex" "Candida parapsilosis intermedia"
"F_CANDD_PRPS-C" "F_CANDD_PRPS_PRPS" "Candida parapsilosis complex" "Candida parapsilosis parapsilosis"
"F_CANDD_PRPS-C" "F_CANDD_PRPS_QURC" "Candida parapsilosis complex" "Candida parapsilosis querci"
"F_CANDD_PRPS-C" "F_CANDD_PRPS_QRCS" "Candida parapsilosis complex" "Candida parapsilosis quercus"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"P_CHLMS" "F_CANDD_DBSH" "Chilomastix" "Candida duobushaemulonii"
"P_CHLMS" "F_CANDD_HMLN" "Chilomastix" "Candida haemulonii"
"P_CHLMS" "B_CANDD_HMLN-C" "Chilomastix" "Candida haemulonii complex"
"B_CTRBC_AMLN-C" "B_CTRBC_AMLN" "Citrobacter amalonaticus complex" "Citrobacter amalonaticus"
"B_CTRBC_AMLN-C" "B_CTRBC_FRMR" "Citrobacter amalonaticus complex" "Citrobacter farmeri"
"B_CTRBC_AMLN-C" "B_CTRBC_SDLK" "Citrobacter amalonaticus complex" "Citrobacter sedlakii"
Added C. freundii complex and Y. pseudotuberculosis complex
2023-07-14 10:49:06 +02:00
"B_CTRBC_FRND-C" "B_CTRBC_BRAK" "Citrobacter freundii complex" "Citrobacter braakii"
"B_CTRBC_FRND-C" "B_CTRBC_FRND" "Citrobacter freundii complex" "Citrobacter freundii"
"B_CTRBC_FRND-C" "B_CTRBC_GLLN" "Citrobacter freundii complex" "Citrobacter gillenii"
"B_CTRBC_FRND-C" "B_CTRBC_MRLN" "Citrobacter freundii complex" "Citrobacter murliniae"
"B_CTRBC_FRND-C" "B_CTRBC_PRTC" "Citrobacter freundii complex" "Citrobacter portucalensis"
"B_CTRBC_FRND-C" "B_CTRBC_SDLK" "Citrobacter freundii complex" "Citrobacter sedlakii"
"B_CTRBC_FRND-C" "B_CTRBC_WRKM" "Citrobacter freundii complex" "Citrobacter werkmanii"
"B_CTRBC_FRND-C" "B_CTRBC_YONG" "Citrobacter freundii complex" "Citrobacter youngae"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_STPHY_CONS" "B_STPHY_ARGN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus argensis"
"B_STPHY_CONS" "B_STPHY_ARLT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus arlettae"
"B_STPHY_CONS" "B_STPHY_ARCL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus auricularis"
"B_STPHY_CONS" "B_STPHY_BRLS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus borealis"
"B_STPHY_CONS" "B_STPHY_CAEL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus caeli"
"B_STPHY_CONS" "B_STPHY_CLDN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus caledonicus"
"B_STPHY_CONS" "B_STPHY_CANS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus canis"
"B_STPHY_CONS" "B_STPHY_CPTS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus capitis"
"B_STPHY_CONS" "B_STPHY_CPTS_CPTS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus capitis capitis"
"B_STPHY_CONS" "B_STPHY_CPTS_URLY" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus capitis urealyticus"
"B_STPHY_CONS" "B_STPHY_CPTS_YTCS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus capitis ureolyticus"
"B_STPHY_CONS" "B_STPHY_CAPR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus caprae"
"B_STPHY_CONS" "B_STPHY_CRNS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus carnosus"
"B_STPHY_CONS" "B_STPHY_CRNS_CRNS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus carnosus carnosus"
"B_STPHY_CONS" "B_STPHY_CRNS_UTLS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus carnosus utilis"
"B_STPHY_CONS" "B_STPHY_CASE" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus casei"
"B_STPHY_CONS" "B_STPHY_CSLY" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus caseolyticus"
"B_STPHY_CONS" "B_STPHY_CHRM" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus chromogenes"
"B_STPHY_CONS" "B_STPHY_COHN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus cohnii"
"B_STPHY_CONS" "B_STPHY_COHN_COHN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus cohnii cohnii"
"B_STPHY_CONS" "B_STPHY_COHN_URLY" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus cohnii urealyticum"
"B_STPHY_CONS" "B_STPHY_COHN_YTCS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus cohnii urealyticus"
"B_STPHY_CONS" "B_STPHY_CNDM" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus condimenti"
"B_STPHY_CONS" "B_STPHY_CRCL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus croceilyticus"
"B_STPHY_CONS" "B_STPHY_DBCK" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus debuckii"
"B_STPHY_CONS" "B_STPHY_DVRS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus devriesei"
"B_STPHY_CONS" "B_STPHY_DRRL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus durrellii"
"B_STPHY_CONS" "B_STPHY_EDPH" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus edaphicus"
"B_STPHY_CONS" "B_STPHY_EPDR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus epidermidis"
"B_STPHY_CONS" "B_STPHY_EQRM" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus equorum"
"B_STPHY_CONS" "B_STPHY_EQRM_EQRM" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus equorum equorum"
"B_STPHY_CONS" "B_STPHY_EQRM_LNNS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus equorum linens"
"B_STPHY_CONS" "B_STPHY_FELS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus felis"
"B_STPHY_CONS" "B_STPHY_FLRT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus fleurettii"
"B_STPHY_CONS" "B_STPHY_GLLN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus gallinarum"
"B_STPHY_CONS" "B_STPHY_HMLY" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus haemolyticus"
"B_STPHY_CONS" "B_STPHY_HMNS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus hominis"
"B_STPHY_CONS" "B_STPHY_HMNS_HMNS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus hominis hominis"
"B_STPHY_CONS" "B_STPHY_HMNS_NVBS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus hominis novobiosepticus"
"B_STPHY_CONS" "B_STPHY_JTTN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus jettensis"
"B_STPHY_CONS" "B_STPHY_KLOS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus kloosii"
"B_STPHY_CONS" "B_STPHY_LNTS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus lentus"
"B_STPHY_CONS" "B_STPHY_LLYD" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus lloydii"
"B_STPHY_CONS" "B_STPHY_LGDN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus lugdunensis"
"B_STPHY_CONS" "B_STPHY_MSSL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus massiliensis"
"B_STPHY_CONS" "B_STPHY_MCRT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus microti"
"B_STPHY_CONS" "B_STPHY_MUSC" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus muscae"
"B_STPHY_CONS" "B_STPHY_NPLN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus nepalensis"
"B_STPHY_CONS" "B_STPHY_PSTR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus pasteuri"
"B_STPHY_CONS" "B_STPHY_PTRS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus petrasii"
"B_STPHY_CONS" "B_STPHY_PTRS_CRCL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus petrasii croceilyticus"
"B_STPHY_CONS" "B_STPHY_PTRS_JTTN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus petrasii jettensis"
"B_STPHY_CONS" "B_STPHY_PTRS_PTRS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus petrasii petrasii"
"B_STPHY_CONS" "B_STPHY_PTRS_PRGN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus petrasii pragensis"
"B_STPHY_CONS" "B_STPHY_PTTN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus pettenkoferi"
"B_STPHY_CONS" "B_STPHY_PSCF" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus piscifermentans"
"B_STPHY_CONS" "B_STPHY_PRGN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus pragensis"
"B_STPHY_CONS" "B_STPHY_PSDX" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus pseudoxylosus"
"B_STPHY_CONS" "B_STPHY_PLVR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus pulvereri"
"B_STPHY_CONS" "B_STPHY_RATT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus ratti"
"B_STPHY_CONS" "B_STPHY_RSTR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus rostri"
"B_STPHY_CONS" "B_STPHY_SCCH" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus saccharolyticus"
"B_STPHY_CONS" "B_STPHY_SPRP" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus saprophyticus"
"B_STPHY_CONS" "B_STPHY_SPRP_BOVS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus saprophyticus bovis"
"B_STPHY_CONS" "B_STPHY_SPRP_SPRP" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus saprophyticus saprophyticus"
"B_STPHY_CONS" "B_STPHY_SCHL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus schleiferi"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_STPHY_CONS" "B_STPHY_SCHL_CGLN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus schleiferi coagulans"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_STPHY_CONS" "B_STPHY_SCHL_SCHL" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus schleiferi schleiferi"
"B_STPHY_CONS" "B_STPHY_SCIR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus sciuri"
"B_STPHY_CONS" "B_STPHY_SCIR_CRNT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus sciuri carnaticus"
"B_STPHY_CONS" "B_STPHY_SCIR_LNTS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus sciuri lentus"
"B_STPHY_CONS" "B_STPHY_SCIR_RDNT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus sciuri rodentium"
"B_STPHY_CONS" "B_STPHY_SCIR_SCIR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus sciuri sciuri"
"B_STPHY_CONS" "B_STPHY_SMLN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus simulans"
"B_STPHY_CONS" "B_STPHY_STPN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus stepanovicii"
"B_STPHY_CONS" "B_STPHY_SCCN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus succinus"
"B_STPHY_CONS" "B_STPHY_SCCN_CASE" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus succinus casei"
"B_STPHY_CONS" "B_STPHY_SCCN_SCCN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus succinus succinus"
"B_STPHY_CONS" "B_STPHY_TWNN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus taiwanensis"
"B_STPHY_CONS" "B_STPHY_URLYT" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus urealyticus"
"B_STPHY_CONS" "B_STPHY_URLY" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus ureilyticus"
"B_STPHY_CONS" "B_STPHY_VRTR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus veratri"
"B_STPHY_CONS" "B_STPHY_VTLN" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus vitulinus"
"B_STPHY_CONS" "B_STPHY_VTLS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus vitulus"
"B_STPHY_CONS" "B_STPHY_WRNR" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus warneri"
"B_STPHY_CONS" "B_STPHY_XYLS" "Coagulase-negative Staphylococcus (CoNS)" "Staphylococcus xylosus"
"B_STPHY_COPS" "B_STPHY_AGNT" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus agnetis"
"B_STPHY_COPS" "B_STPHY_GNTS" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus argenteus"
"B_STPHY_COPS" "B_STPHY_CGLN" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus coagulans"
"B_STPHY_COPS" "B_STPHY_CRNB" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus cornubiensis"
"B_STPHY_COPS" "B_STPHY_DLPH" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus delphini"
"B_STPHY_COPS" "B_STPHY_HYCS" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus hyicus"
"B_STPHY_COPS" "B_STPHY_HYCS_CHRM" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus hyicus chromogenes"
"B_STPHY_COPS" "B_STPHY_HYCS_HYCS" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus hyicus hyicus"
"B_STPHY_COPS" "B_STPHY_INTR" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus intermedius"
"B_STPHY_COPS" "B_STPHY_LUTR" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus lutrae"
"B_STPHY_COPS" "B_STPHY_PSDN" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus pseudintermedius"
"B_STPHY_COPS" "B_STPHY_RTRD" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus roterodami"
"B_STPHY_COPS" "B_STPHY_SCHL_CGLN" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus schleiferi coagulans"
"B_STPHY_COPS" "B_STPHY_SCHW" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus schweitzeri"
"B_STPHY_COPS" "B_STPHY_SIMI" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus simiae"
"B_STPHY_COPS" "B_STPHY_SNGP" "Coagulase-positive Staphylococcus (CoPS)" "Staphylococcus singaporensis"
"B_CORYNF" "B_ARCNB" "Coryneform bacterium" "Arcanobacterium"
"B_CORYNF" "B_ARCNB_HMLY" "Coryneform bacterium" "Arcanobacterium haemolyticum"
"B_CORYNF" "B_BCTRM" "Coryneform bacterium" "Brevibacterium"
"B_CORYNF" "B_BCTRM_CASE" "Coryneform bacterium" "Brevibacterium casei"
"B_CORYNF" "B_BCTRM_EPDR" "Coryneform bacterium" "Brevibacterium epidermidis"
"B_CORYNF" "B_BCTRM_MCBR" "Coryneform bacterium" "Brevibacterium mcbrellneri"
"B_CORYNF" "B_CLLLM" "Coryneform bacterium" "Cellulomonas"
"B_CORYNF" "B_CLLLSM" "Coryneform bacterium" "Cellulosimicrobium"
"B_CORYNF" "B_CLLLSM_CLLL" "Coryneform bacterium" "Cellulosimicrobium cellulans"
"B_CORYNF" "B_CRYNB" "Coryneform bacterium" "Corynebacterium"
"B_CORYNF" "B_CRYNB_ACCL" "Coryneform bacterium" "Corynebacterium accolens"
"B_CORYNF" "B_CRYNB_AFRM" "Coryneform bacterium" "Corynebacterium afermentans"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_CORYNF" "B_CRYNB_AFRM_AFRM" "Coryneform bacterium" "Corynebacterium afermentans afermentans"
"B_CORYNF" "B_CRYNB_AFRM_LPPH" "Coryneform bacterium" "Corynebacterium afermentans lipophilum"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_CORYNF" "B_CRYNB_AMYC" "Coryneform bacterium" "Corynebacterium amycolatum"
"B_CORYNF" "B_CRYNB_ARGN" "Coryneform bacterium" "Corynebacterium argentoratense"
"B_CORYNF" "B_CRYNB_ARMC" "Coryneform bacterium" "Corynebacterium aurimucosum"
"B_CORYNF" "B_CRYNB_AURS" "Coryneform bacterium" "Corynebacterium auris"
"B_CORYNF" "B_CRYNB_BOVS" "Coryneform bacterium" "Corynebacterium bovis"
"B_CORYNF" "B_CRYNB_COYL" "Coryneform bacterium" "Corynebacterium coyleae"
"B_CORYNF" "B_CRYNB_CYST" "Coryneform bacterium" "Corynebacterium cystitidis"
"B_CORYNF" "B_CRYNB_DPHT" "Coryneform bacterium" "Corynebacterium diphtheriae"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_CORYNF" "B_CRYNB_DPHT_DPHT" "Coryneform bacterium" "Corynebacterium diphtheriae diphtheriae"
"B_CORYNF" "B_CRYNB_DPHT_LSNN" "Coryneform bacterium" "Corynebacterium diphtheriae lausannense"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_CORYNF" "B_CRYNB_GLCR" "Coryneform bacterium" "Corynebacterium glucuronolyticum"
"B_CORYNF" "B_CRYNB_GLTM" "Coryneform bacterium" "Corynebacterium glutamicum"
"B_CORYNF" "B_CRYNB_JEKM" "Coryneform bacterium" "Corynebacterium jeikeium"
"B_CORYNF" "B_CRYNB_KTSC" "Coryneform bacterium" "Corynebacterium kutscheri"
"B_CORYNF" "B_CRYNB_MCGN" "Coryneform bacterium" "Corynebacterium macginleyi"
"B_CORYNF" "B_CRYNB_MTRC" "Coryneform bacterium" "Corynebacterium matruchotii"
"B_CORYNF" "B_CRYNB_MNTS" "Coryneform bacterium" "Corynebacterium minutissimum"
"B_CORYNF" "B_CRYNB_MCFC" "Coryneform bacterium" "Corynebacterium mucifaciens"
"B_CORYNF" "B_CRYNB_MYCT" "Coryneform bacterium" "Corynebacterium mycetoides"
"B_CORYNF" "B_CRYNB_PLSM" "Coryneform bacterium" "Corynebacterium pilosum"
"B_CORYNF" "B_CRYNB_PRPN" "Coryneform bacterium" "Corynebacterium propinquum"
"B_CORYNF" "B_CRYNB_PSDD" "Coryneform bacterium" "Corynebacterium pseudodiphtheriticum"
"B_CORYNF" "B_CRYNB_PSDT" "Coryneform bacterium" "Corynebacterium pseudotuberculosis"
"B_CORYNF" "B_CRYNB_RENL" "Coryneform bacterium" "Corynebacterium renale"
"B_CORYNF" "B_CRYNB_STRT" "Coryneform bacterium" "Corynebacterium striatum"
"B_CORYNF" "B_CRYNB_ULCR" "Coryneform bacterium" "Corynebacterium ulcerans"
"B_CORYNF" "B_CRYNB_URLY" "Coryneform bacterium" "Corynebacterium urealyticum"
"B_CORYNF" "B_CRYNB_XRSS" "Coryneform bacterium" "Corynebacterium xerosis"
"B_CORYNF" "B_DRMBC" "Coryneform bacterium" "Dermabacter"
"B_CORYNF" "B_DRMBC_HMNS" "Coryneform bacterium" "Dermabacter hominis"
"B_CORYNF" "B_LEFSN" "Coryneform bacterium" "Leifsonia"
"B_CORYNF" "B_LEFSN_AQTC" "Coryneform bacterium" "Leifsonia aquatica"
"B_CORYNF" "B_MCRBC" "Coryneform bacterium" "Microbacterium"
"B_CORYNF" "B_MCRBC_ARBR" "Coryneform bacterium" "Microbacterium arborescens"
"B_CORYNF" "B_MCRBC_IMPR" "Coryneform bacterium" "Microbacterium imperiale"
"B_CORYNF" "B_MCRBC_LQFC" "Coryneform bacterium" "Microbacterium liquefaciens"
"B_CORYNF" "B_MCRBC_OXYD" "Coryneform bacterium" "Microbacterium oxydans"
"B_CORYNF" "B_ORSKV" "Coryneform bacterium" "Oerskovia"
"B_CORYNF" "B_ORSKV_TRBT" "Coryneform bacterium" "Oerskovia turbata"
"B_CORYNF" "B_ROTHI" "Coryneform bacterium" "Rothia"
"B_CORYNF" "B_ROTHI_DNTC" "Coryneform bacterium" "Rothia dentocariosa"
"B_CORYNF" "B_ROTHI_MCLG" "Coryneform bacterium" "Rothia mucilaginosa"
"B_CORYNF" "B_TRPRL" "Coryneform bacterium" "Trueperella"
"B_CORYNF" "B_TRPRL_BRNR" "Coryneform bacterium" "Trueperella bernardiae"
"B_CORYNF" "B_TRPRL_PYGN" "Coryneform bacterium" "Trueperella pyogenes"
"B_CORYNF" "B_TRCLL" "Coryneform bacterium" "Turicella"
"B_CORYNF" "B_TRCLL_OTTD" "Coryneform bacterium" "Turicella otitidis"
"B_ENTRBC_CLOC-C" "B_ENTRBC_ASBR" "Enterobacter cloacae complex" "Enterobacter asburiae"
"B_ENTRBC_CLOC-C" "B_ENTRBC_CLOC" "Enterobacter cloacae complex" "Enterobacter cloacae"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_ENTRBC_CLOC-C" "B_ENTRBC_CLOC_CLOC" "Enterobacter cloacae complex" "Enterobacter cloacae cloacae"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_ENTRBC_CLOC-C" "B_ENTRBC_CLOC_DSSL" "Enterobacter cloacae complex" "Enterobacter cloacae dissolvens"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC" "Enterobacter cloacae complex" "Enterobacter hormaechei"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_HFFM" "Enterobacter cloacae complex" "Enterobacter hormaechei hoffmannii"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_HRMC" "Enterobacter cloacae complex" "Enterobacter hormaechei hormaechei"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_OHAR" "Enterobacter cloacae complex" "Enterobacter hormaechei oharae"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_STGR" "Enterobacter cloacae complex" "Enterobacter hormaechei steigerwaltii"
"B_ENTRBC_CLOC-C" "B_ENTRBC_HRMC_XNGF" "Enterobacter cloacae complex" "Enterobacter hormaechei xiangfangensis"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_ENTRBC_CLOC-C" "B_ENTRBC_KOBE" "Enterobacter cloacae complex" "Enterobacter kobei"
"B_ENTRBC_CLOC-C" "B_ENTRBC_LDWG" "Enterobacter cloacae complex" "Enterobacter ludwigii"
"B_ENTRBC_CLOC-C" "B_ENTRBC_NMPR" "Enterobacter cloacae complex" "Enterobacter nimipressuralis"
"B_HACEK" "B_ACTNB_ACTN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Actinobacillus actinomycetemcomitans"
"B_HACEK" "B_AGGRG" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter"
"B_HACEK" "B_AGGRG_ACTN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter actinomycetemcomitans"
"B_HACEK" "B_AGGRG_APHR" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter aphrophilus"
"B_HACEK" "B_AGGRG_KILN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter kilianii"
"B_HACEK" "B_AGGRG_PRPH" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter paraphrophilus"
"B_HACEK" "B_AGGRG_SGNS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Aggregatibacter segnis"
"B_HACEK" "B_CRDBC_HMNS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Cardiobacterium hominis"
"B_HACEK" "B_EKNLL_CRRD" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Eikenella corrodens"
"B_HACEK" "B_HMPHL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus"
"B_HACEK" "B_HMPHL_ACTN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus actinomycetemcomitans"
"B_HACEK" "B_HMPHL_AEGY" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus aegyptius"
"B_HACEK" "B_HMPHL_APHR" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus aphrophilus"
"B_HACEK" "B_HMPHL_AVIM" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus avium"
"B_HACEK" "B_HMPHL_DCRY" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus ducreyi"
"B_HACEK" "B_HMPHL_EQGN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus equigenitalis"
"B_HACEK" "B_HMPHL_FELS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus felis"
"B_HACEK" "B_HMPHL_HMGL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus haemoglobinophilus"
"B_HACEK" "B_HMPHL_HMLY" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus haemolyticus"
"B_HACEK" "B_HMPHL_INFL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus influenzae"
"B_HACEK" "B_HMPHL_MSSL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus massiliensis"
"B_HACEK" "B_HMPHL_PRCN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus paracuniculus"
"B_HACEK" "B_HMPHL_PRGL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus paragallinarum"
"B_HACEK" "B_HMPHL_PRHM" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus parahaemolyticus"
"B_HACEK" "B_HMPHL_PRNF" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus parainfluenzae"
"B_HACEK" "B_HMPHL_PRPH" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus paraphrohaemolyticus"
"B_HACEK" "B_HMPHL_PHLS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus paraphrophilus"
"B_HACEK" "B_HMPHL_PRSS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus parasuis"
"B_HACEK" "B_HMPHL_PSCM" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus piscium"
"B_HACEK" "B_HMPHL_PTTM" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus pittmaniae"
"B_HACEK" "B_HMPHL_PLRP" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus pleuropneumoniae"
"B_HACEK" "B_HMPHL_QNTN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus quentini"
"B_HACEK" "B_HMPHL_SGNS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus segnis"
"B_HACEK" "B_HMPHL_SMNL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus seminalis"
"B_HACEK" "B_HMPHL_SPTR" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus sputorum"
"B_HACEK" "B_HMPHL_VGNL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Haemophilus vaginalis"
"B_HACEK" "B_KGLLA" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella"
"B_HACEK" "B_KGLLA_DNTR" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella denitrificans"
"B_HACEK" "B_KGLLA_INDL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella indologenes"
"B_HACEK" "B_KGLLA_KING" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella kingae"
"B_HACEK" "B_KGLLA_NGVN" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella negevensis"
"B_HACEK" "B_KGLLA_ORAL" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella orale"
"B_HACEK" "B_KGLLA_ORLS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella oralis"
"B_HACEK" "B_KGLLA_POTS" "Haemophilus, Aggregatibacter, Cardiobacterium, Eikenella, Kingella (HACEK)" "Kingella potus"
"F_MYRZY_GLLR-C" "F_CANDD_FRMN" "Meyerozyma guilliermondii complex" "Candida fermentati"
"F_MYRZY_GLLR-C" "F_MYRZY_CRBB" "Meyerozyma guilliermondii complex" "Meyerozyma caribbica"
"F_MYRZY_GLLR-C" "F_MYRZY_CRPP" "Meyerozyma guilliermondii complex" "Meyerozyma carpophila"
"F_MYRZY_GLLR-C" "F_MYRZY_GLLR" "Meyerozyma guilliermondii complex" "Meyerozyma guilliermondii"
MO group fixes
2023-07-12 16:04:48 +02:00
"F_MYRZY_GLLR-C" "F_MYRZY_GLLR_CRPP" "Meyerozyma guilliermondii complex" "Meyerozyma guilliermondii carpophila"
"F_MYRZY_GLLR-C" "F_MYRZY_GLLR_JPNC" "Meyerozyma guilliermondii complex" "Meyerozyma guilliermondii japonica"
"F_MYRZY_GLLR-C" "F_MYRZY_GLLR_MUHR" "Meyerozyma guilliermondii complex" "Meyerozyma guilliermondii muhira"
"F_MYRZY_GLLR-C" "F_MYRZY_GLLR_PSDG" "Meyerozyma guilliermondii complex" "Meyerozyma guilliermondii pseudoguilliermondii"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_MYCBC_AVIM-C" "B_MYCBC_AVIM" "Mycobacterium avium-intracellulare complex" "Mycobacterium avium"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_MYCBC_AVIM-C" "B_MYCBC_AVIM_AVIM" "Mycobacterium avium-intracellulare complex" "Mycobacterium avium avium"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_MYCBC_AVIM-C" "B_MYCBC_AVIM_PRTB" "Mycobacterium avium-intracellulare complex" "Mycobacterium avium paratuberculosis"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_MYCBC_AVIM-C" "B_MYCBC_AVIM_SLVT" "Mycobacterium avium-intracellulare complex" "Mycobacterium avium silvaticum"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_MYCBC_AVIM-C" "B_MYCBC_LLRE" "Mycobacterium avium-intracellulare complex" "Mycobacterium intracellulare"
"B_MYCBC_AVIM-C" "B_MYCBC_LLRE_CHMR" "Mycobacterium avium-intracellulare complex" "Mycobacterium intracellulare chimaera"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_MYCBC_AVIM-C" "B_MYCBC_LLRE_INTR" "Mycobacterium avium-intracellulare complex" "Mycobacterium intracellulare intracellulare"
"B_MYCBC_AVIM-C" "B_MYCBC_LLRE_YNGN" "Mycobacterium avium-intracellulare complex" "Mycobacterium intracellulare yongonense"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_MYCBC_TBRC-C" "B_MYCBC_AFRC" "Mycobacterium tuberculosis complex" "Mycobacterium africanum"
"B_MYCBC_TBRC-C" "B_MYCBC_BOVS" "Mycobacterium tuberculosis complex" "Mycobacterium bovis"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_MYCBC_TBRC-C" "B_MYCBC_BOVS_BOVS" "Mycobacterium tuberculosis complex" "Mycobacterium bovis bovis"
"B_MYCBC_TBRC-C" "B_MYCBC_BOVS_CAPR" "Mycobacterium tuberculosis complex" "Mycobacterium bovis caprae"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_MYCBC_TBRC-C" "B_MYCBC_CAPR" "Mycobacterium tuberculosis complex" "Mycobacterium caprae"
"B_MYCBC_TBRC-C" "B_MYCBC_MCRT" "Mycobacterium tuberculosis complex" "Mycobacterium microti"
"B_MYCBC_TBRC-C" "B_MYCBC_MUNG" "Mycobacterium tuberculosis complex" "Mycobacterium mungi"
"B_MYCBC_TBRC-C" "B_MYCBC_ORYG" "Mycobacterium tuberculosis complex" "Mycobacterium orygis"
"B_MYCBC_TBRC-C" "B_MYCBC_PNNP" "Mycobacterium tuberculosis complex" "Mycobacterium pinnipedii"
"B_MYCBC_TBRC-C" "B_MYCBC_TBRC" "Mycobacterium tuberculosis complex" "Mycobacterium tuberculosis"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_MYCBC_TBRC-C" "B_MYCBC_TBRC_CAPR" "Mycobacterium tuberculosis complex" "Mycobacterium tuberculosis caprae"
"B_MYCBC_TBRC-C" "B_MYCBC_TBRC_TBRC" "Mycobacterium tuberculosis complex" "Mycobacterium tuberculosis tuberculosis"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_PSDMN_FLRS-C" "B_PSDMN_FLRS" "Pseudomonas fluorescens complex" "Pseudomonas fluorescens"
"B_MYCBC_RGM" "B_MYCBC_ABSC_ABSC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium abscessus abscessus"
"B_MYCBC_RGM" "B_MYCBC_ABSC_BLLT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium abscessus bolletii"
"B_MYCBC_RGM" "B_MYCBC_ABSC_MSSL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium abscessus massiliense"
"B_MYCBC_RGM" "B_MYCBC_AGRI" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium agri"
"B_MYCBC_RGM" "B_MYCBC_ACHN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium aichiense"
"B_MYCBC_RGM" "B_MYCBC_ALGR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium algericum"
"B_MYCBC_RGM" "B_MYCBC_ALVE" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium alvei"
"B_MYCBC_RGM" "B_MYCBC_ANYN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium anyangense"
"B_MYCBC_RGM" "B_MYCBC_ARBN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium arabiense"
"B_MYCBC_RGM" "B_MYCBC_ARMT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium aromaticivorans"
"B_MYCBC_RGM" "B_MYCBC_ABGN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium aubagnense"
"B_MYCBC_RGM" "B_MYCBC_AURM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium aurum"
"B_MYCBC_RGM" "B_MYCBC_ASTR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium austroafricanum"
"B_MYCBC_RGM" "B_MYCBC_BCTR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium bacteremicum"
"B_MYCBC_RGM" "B_MYCBC_BNCK" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium boenickei"
"B_MYCBC_RGM" "B_MYCBC_BRGL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium bourgelatii"
"B_MYCBC_RGM" "B_MYCBC_BRSB" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium brisbanense"
"B_MYCBC_RGM" "B_MYCBC_BRUM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium brumae"
"B_MYCBC_RGM" "B_MYCBC_CNRS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium canariasense"
"B_MYCBC_RGM" "B_MYCBC_CLRF" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium celeriflavum"
"B_MYCBC_RGM" "B_MYCBC_CHLN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chelonae"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_MYCBC_RGM" "B_MYCBC_CHLN_ABSC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chelonae abscessus"
"B_MYCBC_RGM" "B_MYCBC_CHLN_BOVS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chelonae bovis"
"B_MYCBC_RGM" "B_MYCBC_CHLN_CHLN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chelonae chelonae"
"B_MYCBC_RGM" "B_MYCBC_CHLN_GWNK" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chelonae gwanakae"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_MYCBC_RGM" "B_MYCBC_CHIT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chitae"
"B_MYCBC_RGM" "B_MYCBC_CHLR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chlorophenolicum"
"B_MYCBC_RGM" "B_MYCBC_CHBN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium chubuense"
"B_MYCBC_RGM" "B_MYCBC_CNFL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium confluentis"
"B_MYCBC_RGM" "B_MYCBC_CSMT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium cosmeticum"
"B_MYCBC_RGM" "B_MYCBC_CRCN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium crocinum"
"B_MYCBC_RGM" "B_MYCBC_DRNH" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium diernhoferi"
"B_MYCBC_RGM" "B_MYCBC_DUVL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium duvalii"
"B_MYCBC_RGM" "B_MYCBC_ELPH" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium elephantis"
"B_MYCBC_RGM" "B_MYCBC_FLLX" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fallax"
"B_MYCBC_RGM" "B_MYCBC_FLVS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium flavescens"
"B_MYCBC_RGM" "B_MYCBC_VRNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fluoranthenivorans"
"B_MYCBC_RGM" "B_MYCBC_FRTT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fortuitum"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_MYCBC_RGM" "B_MYCBC_FRTT_ACTM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fortuitum acetamidolyticum"
"B_MYCBC_RGM" "B_MYCBC_FRTT_FRTT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium fortuitum fortuitum"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_MYCBC_RGM" "B_MYCBC_FRNK" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium franklinii"
"B_MYCBC_RGM" "B_MYCBC_FRDR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium frederiksbergense"
"B_MYCBC_RGM" "B_MYCBC_GADM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium gadium"
"B_MYCBC_RGM" "B_MYCBC_GLVM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium gilvum"
"B_MYCBC_RGM" "B_MYCBC_GOOD" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium goodii"
"B_MYCBC_RGM" "B_MYCBC_HSSC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium hassiacum"
"B_MYCBC_RGM" "B_MYCBC_HPPC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium hippocampi"
"B_MYCBC_RGM" "B_MYCBC_HDLR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium hodleri"
"B_MYCBC_RGM" "B_MYCBC_HLST" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium holsaticum"
"B_MYCBC_RGM" "B_MYCBC_HSTN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium houstonense"
"B_MYCBC_RGM" "B_MYCBC_IMMN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium immunogenum"
"B_MYCBC_RGM" "B_MYCBC_INSB" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium insubricum"
"B_MYCBC_RGM" "B_MYCBC_IRNC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium iranicum"
"B_MYCBC_RGM" "B_MYCBC_KMSS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium komossense"
"B_MYCBC_RGM" "B_MYCBC_LTRL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium litorale"
"B_MYCBC_RGM" "B_MYCBC_LLTZ" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium llatzerense"
"B_MYCBC_RGM" "B_MYCBC_MDGS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium madagascariense"
"B_MYCBC_RGM" "B_MYCBC_MGRT" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium mageritense"
"B_MYCBC_RGM" "B_MYCBC_MNCN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium monacense"
"B_MYCBC_RGM" "B_MYCBC_MRKN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium moriokaense"
"B_MYCBC_RGM" "B_MYCBC_MCGN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium mucogenicum"
"B_MYCBC_RGM" "B_MYCBC_MURL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium murale"
"B_MYCBC_RGM" "B_MYCBC_NERM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium neoaurum"
"B_MYCBC_RGM" "B_MYCBC_NWRL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium neworleansense"
"B_MYCBC_RGM" "B_MYCBC_NVCS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium novocastrense"
"B_MYCBC_RGM" "B_MYCBC_OBNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium obuense"
"B_MYCBC_RGM" "B_MYCBC_PLLN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium pallens"
"B_MYCBC_RGM" "B_MYCBC_PRFR" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium parafortuitum"
"B_MYCBC_RGM" "B_MYCBC_GRNM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium peregrinum"
"B_MYCBC_RGM" "B_MYCBC_PHLE" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium phlei"
"B_MYCBC_RGM" "B_MYCBC_PHCC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium phocaicum"
"B_MYCBC_RGM" "B_MYCBC_PRCN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium porcinum"
"B_MYCBC_RGM" "B_MYCBC_RFRE" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium poriferae"
"B_MYCBC_RGM" "B_MYCBC_PSYC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium psychrotolerans"
"B_MYCBC_RGM" "B_MYCBC_PYRN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium pyrenivorans"
"B_MYCBC_RGM" "B_MYCBC_RHDS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium rhodesiae"
"B_MYCBC_RGM" "B_MYCBC_RUFM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium rufum"
"B_MYCBC_RGM" "B_MYCBC_RTLM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium rutilum"
"B_MYCBC_RGM" "B_MYCBC_SLMN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium salmoniphilum"
"B_MYCBC_RGM" "B_MYCBC_SDMN" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium sediminis"
"B_MYCBC_RGM" "B_MYCBC_SNGL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium senegalense"
"B_MYCBC_RGM" "B_MYCBC_SPTC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium septicum"
"B_MYCBC_RGM" "B_MYCBC_STNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium setense"
"B_MYCBC_RGM" "B_MYCBC_SMGM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium smegmatis"
"B_MYCBC_RGM" "B_MYCBC_SPHG" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium sphagni"
"B_MYCBC_RGM" "B_MYCBC_THRM" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium thermoresistibile"
"B_MYCBC_RGM" "B_MYCBC_TKNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium tokaiense"
"B_MYCBC_RGM" "B_MYCBC_VACC" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium vaccae"
"B_MYCBC_RGM" "B_MYCBC_VNBL" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium vanbaalenii"
"B_MYCBC_RGM" "B_MYCBC_WLNS" "Rapidly growing Mycobacterium (RGM)" "Mycobacterium wolinskyi"
"B_MYCBC_SGM" "B_MYCBC_FRCN" "Slowly growing Mycobacterium (SGM)" "Mycobacterium farcinogenes"
"B_MYCBC_SGM" "B_MYCBC_GSTR" "Slowly growing Mycobacterium (SGM)" "Mycobacterium gastri"
"B_MYCBC_SGM" "B_MYCBC_GNVN" "Slowly growing Mycobacterium (SGM)" "Mycobacterium genavense"
"B_MYCBC_SGM" "B_MYCBC_HMPH" "Slowly growing Mycobacterium (SGM)" "Mycobacterium haemophilum"
"B_MYCBC_SGM" "B_MYCBC_KNSS" "Slowly growing Mycobacterium (SGM)" "Mycobacterium kansasii"
"B_MYCBC_SGM" "B_MYCBC_LEPR" "Slowly growing Mycobacterium (SGM)" "Mycobacterium leprae"
"B_MYCBC_SGM" "B_MYCBC_LPRM" "Slowly growing Mycobacterium (SGM)" "Mycobacterium lepraemurium"
"B_MYCBC_SGM" "B_MYCBC_MLMN" "Slowly growing Mycobacterium (SGM)" "Mycobacterium malmoense"
"B_MYCBC_SGM" "B_MYCBC_MRNM" "Slowly growing Mycobacterium (SGM)" "Mycobacterium marinum"
"B_STRPT_GRPA" "B_STRPT_PYGN" "Streptococcus Group A" "Streptococcus pyogenes"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_STRPT_ABCG" "B_STRPT_GRPA" "Streptococcus Group A, B, C, G" "Streptococcus Group A"
"B_STRPT_ABCG" "B_STRPT_GRPB" "Streptococcus Group A, B, C, G" "Streptococcus Group B"
"B_STRPT_ABCG" "B_STRPT_GRPC" "Streptococcus Group A, B, C, G" "Streptococcus Group C"
"B_STRPT_ABCG" "B_STRPT_GRPG" "Streptococcus Group A, B, C, G" "Streptococcus Group G"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_STRPT_ABCG" "B_STRPT_AGLC" "Streptococcus Group A, B, C, G" "Streptococcus agalactiae"
"B_STRPT_ABCG" "B_STRPT_CANS" "Streptococcus Group A, B, C, G" "Streptococcus canis"
"B_STRPT_ABCG" "B_STRPT_DYSG" "Streptococcus Group A, B, C, G" "Streptococcus dysgalactiae"
"B_STRPT_ABCG" "B_STRPT_DYSG_DYSG" "Streptococcus Group A, B, C, G" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_ABCG" "B_STRPT_DYSG_EQSM" "Streptococcus Group A, B, C, G" "Streptococcus dysgalactiae equisimilis"
"B_STRPT_ABCG" "B_STRPT_EQUI" "Streptococcus Group A, B, C, G" "Streptococcus equi"
"B_STRPT_ABCG" "B_STRPT_EQUI_EQUI" "Streptococcus Group A, B, C, G" "Streptococcus equi equi"
"B_STRPT_ABCG" "B_STRPT_EQUI_RMNT" "Streptococcus Group A, B, C, G" "Streptococcus equi ruminatorum"
"B_STRPT_ABCG" "B_STRPT_EQUI_ZPDM" "Streptococcus Group A, B, C, G" "Streptococcus equi zooepidemicus"
"B_STRPT_ABCG" "B_STRPT_PYGN" "Streptococcus Group A, B, C, G" "Streptococcus pyogenes"
"B_STRPT_GRPB" "B_STRPT_AGLC" "Streptococcus Group B" "Streptococcus agalactiae"
"B_STRPT_GRPC" "B_STRPT_DYSG" "Streptococcus Group C" "Streptococcus dysgalactiae"
"B_STRPT_GRPC" "B_STRPT_DYSG_DYSG" "Streptococcus Group C" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_GRPC" "B_STRPT_DYSG_EQSM" "Streptococcus Group C" "Streptococcus dysgalactiae equisimilis"
"B_STRPT_GRPC" "B_STRPT_EQUI" "Streptococcus Group C" "Streptococcus equi"
"B_STRPT_GRPC" "B_STRPT_EQUI_EQUI" "Streptococcus Group C" "Streptococcus equi equi"
"B_STRPT_GRPC" "B_STRPT_EQUI_RMNT" "Streptococcus Group C" "Streptococcus equi ruminatorum"
"B_STRPT_GRPC" "B_STRPT_EQUI_ZPDM" "Streptococcus Group C" "Streptococcus equi zooepidemicus"
"B_STRPT_GRPF" "B_STRPT_ANGN" "Streptococcus Group F" "Streptococcus anginosus"
"B_STRPT_GRPF" "B_STRPT_ANGN_ANGN" "Streptococcus Group F" "Streptococcus anginosus anginosus"
"B_STRPT_GRPF" "B_STRPT_ANGN_WHLY" "Streptococcus Group F" "Streptococcus anginosus whileyi"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_STRPT_GRPF" "B_STRPT_CNST" "Streptococcus Group F" "Streptococcus constellatus"
"B_STRPT_GRPF" "B_STRPT_CNST_CNST" "Streptococcus Group F" "Streptococcus constellatus constellatus"
"B_STRPT_GRPF" "B_STRPT_CNST_PHRY" "Streptococcus Group F" "Streptococcus constellatus pharyngis"
"B_STRPT_GRPF" "B_STRPT_CNST_VBRG" "Streptococcus Group F" "Streptococcus constellatus viborgensis"
"B_STRPT_GRPF" "B_STRPT_INTR" "Streptococcus Group F" "Streptococcus intermedius"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_STRPT_GRPG" "B_STRPT_CANS" "Streptococcus Group G" "Streptococcus canis"
"B_STRPT_GRPG" "B_STRPT_DYSG" "Streptococcus Group G" "Streptococcus dysgalactiae"
"B_STRPT_GRPG" "B_STRPT_DYSG_DYSG" "Streptococcus Group G" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_GRPG" "B_STRPT_DYSG_EQSM" "Streptococcus Group G" "Streptococcus dysgalactiae equisimilis"
"B_STRPT_GRPH" "B_STRPT_SNGN" "Streptococcus Group H" "Streptococcus sanguinis"
"B_STRPT_GRPK" "B_STRPT_SLVR" "Streptococcus Group K" "Streptococcus salivarius"
"B_STRPT_GRPK" "B_STRPT_SLVR_SLVR" "Streptococcus Group K" "Streptococcus salivarius salivarius"
"B_STRPT_GRPK" "B_STRPT_SLVR_THRM" "Streptococcus Group K" "Streptococcus salivarius thermophilus"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_STRPT_GRPL" "B_STRPT_DYSG" "Streptococcus Group L" "Streptococcus dysgalactiae"
"B_STRPT_GRPL" "B_STRPT_DYSG_DYSG" "Streptococcus Group L" "Streptococcus dysgalactiae dysgalactiae"
"B_STRPT_GRPL" "B_STRPT_DYSG_EQSM" "Streptococcus Group L" "Streptococcus dysgalactiae equisimilis"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_STRPT_VIRI" "B_STRPT_MILL" "Viridans Group Streptococcus (VGS)" "Milleri Group Streptococcus (MGS)"
"B_STRPT_VIRI" "B_STRPT_ACDM" "Viridans Group Streptococcus (VGS)" "Streptococcus acidominimus"
"B_STRPT_VIRI" "B_STRPT_ANGN" "Viridans Group Streptococcus (VGS)" "Streptococcus anginosus"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_STRPT_VIRI" "B_STRPT_ANGN_ANGN" "Viridans Group Streptococcus (VGS)" "Streptococcus anginosus anginosus"
"B_STRPT_VIRI" "B_STRPT_ANGN_WHLY" "Viridans Group Streptococcus (VGS)" "Streptococcus anginosus whileyi"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_STRPT_VIRI" "B_STRPT_CNST" "Viridans Group Streptococcus (VGS)" "Streptococcus constellatus"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_STRPT_VIRI" "B_STRPT_CNST_CNST" "Viridans Group Streptococcus (VGS)" "Streptococcus constellatus constellatus"
"B_STRPT_VIRI" "B_STRPT_CNST_PHRY" "Viridans Group Streptococcus (VGS)" "Streptococcus constellatus pharyngis"
"B_STRPT_VIRI" "B_STRPT_CNST_VBRG" "Viridans Group Streptococcus (VGS)" "Streptococcus constellatus viborgensis"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_STRPT_VIRI" "B_STRPT_CRCT" "Viridans Group Streptococcus (VGS)" "Streptococcus criceti"
"B_STRPT_VIRI" "B_STRPT_CRST" "Viridans Group Streptococcus (VGS)" "Streptococcus cristatus"
"B_STRPT_VIRI" "B_STRPT_DOWN" "Viridans Group Streptococcus (VGS)" "Streptococcus downei"
"B_STRPT_VIRI" "B_STRPT_EQNS" "Viridans Group Streptococcus (VGS)" "Streptococcus equinus"
"B_STRPT_VIRI" "B_STRPT_FERS" "Viridans Group Streptococcus (VGS)" "Streptococcus ferus"
"B_STRPT_VIRI" "B_STRPT_GRDN" "Viridans Group Streptococcus (VGS)" "Streptococcus gordonii"
"B_STRPT_VIRI" "B_STRPT_INTR" "Viridans Group Streptococcus (VGS)" "Streptococcus intermedius"
"B_STRPT_VIRI" "B_STRPT_MACC" "Viridans Group Streptococcus (VGS)" "Streptococcus macacae"
"B_STRPT_VIRI" "B_STRPT_MITS" "Viridans Group Streptococcus (VGS)" "Streptococcus mitis"
"B_STRPT_VIRI" "B_STRPT_MTNS" "Viridans Group Streptococcus (VGS)" "Streptococcus mutans"
"B_STRPT_VIRI" "B_STRPT_ORLS" "Viridans Group Streptococcus (VGS)" "Streptococcus oralis"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_STRPT_VIRI" "B_STRPT_ORLS_DNTS" "Viridans Group Streptococcus (VGS)" "Streptococcus oralis dentisani"
"B_STRPT_VIRI" "B_STRPT_ORLS_ORLS" "Viridans Group Streptococcus (VGS)" "Streptococcus oralis oralis"
"B_STRPT_VIRI" "B_STRPT_ORLS_TGRN" "Viridans Group Streptococcus (VGS)" "Streptococcus oralis tigurinus"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_STRPT_VIRI" "B_STRPT_PRSN" "Viridans Group Streptococcus (VGS)" "Streptococcus parasanguinis"
"B_STRPT_VIRI" "B_STRPT_RATT" "Viridans Group Streptococcus (VGS)" "Streptococcus ratti"
"B_STRPT_VIRI" "B_STRPT_SLVR" "Viridans Group Streptococcus (VGS)" "Streptococcus salivarius"
MO group fixes
2023-07-12 16:04:48 +02:00
"B_STRPT_VIRI" "B_STRPT_SLVR_SLVR" "Viridans Group Streptococcus (VGS)" "Streptococcus salivarius salivarius"
"B_STRPT_VIRI" "B_STRPT_SLVR_THRM" "Viridans Group Streptococcus (VGS)" "Streptococcus salivarius thermophilus"
new species groups, updated clinical breakpoints
2023-07-08 17:30:05 +02:00
"B_STRPT_VIRI" "B_STRPT_SNGN" "Viridans Group Streptococcus (VGS)" "Streptococcus sanguinis"
"B_STRPT_VIRI" "B_STRPT_SBRN" "Viridans Group Streptococcus (VGS)" "Streptococcus sobrinus"
"B_STRPT_VIRI" "B_STRPT_SUIS" "Viridans Group Streptococcus (VGS)" "Streptococcus suis"
"B_STRPT_VIRI" "B_STRPT_UBRS" "Viridans Group Streptococcus (VGS)" "Streptococcus uberis"
"B_STRPT_VIRI" "B_STRPT_VSTB" "Viridans Group Streptococcus (VGS)" "Streptococcus vestibularis"
Added C. freundii complex and Y. pseudotuberculosis complex
2023-07-14 10:49:06 +02:00
"B_YERSN_PSDT-C" "B_YERSN_PSTS" "Yersinia pseudotuberculosis complex" "Yersinia pestis"
"B_YERSN_PSDT-C" "B_YERSN_PSDT" "Yersinia pseudotuberculosis complex" "Yersinia pseudotuberculosis"
"B_YERSN_PSDT-C" "B_YERSN_PSDT_PSTS" "Yersinia pseudotuberculosis complex" "Yersinia pseudotuberculosis pestis"
"B_YERSN_PSDT-C" "B_YERSN_PSDT_PSDT" "Yersinia pseudotuberculosis complex" "Yersinia pseudotuberculosis pseudotuberculosis"
"B_YERSN_PSDT-C" "B_YERSN_SMLS" "Yersinia pseudotuberculosis complex" "Yersinia similis"
"B_YERSN_PSDT-C" "B_YERSN_WTRS" "Yersinia pseudotuberculosis complex" "Yersinia wautersii"
Copy Permalink