P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-01-15 08:01:38 +01:00
Code Releases Activity
461eec9bac
AMR/inst/eucast/eucast_rules.tsv

183 lines
23 KiB
Plaintext
Raw Normal View History

new EUCAST rules algorithm
2019-04-05 18:47:39 +02:00
if_mo_property like_is_one_of this_value and_these_antibiotics have_these_values then_change_these_antibiotics to_value reference.rule reference.rule_group
order is Enterobacteriales ampi S amox S Enterobacteriales (Order) Breakpoints
order is Enterobacteriales ampi I amox I Enterobacteriales (Order) Breakpoints
order is Enterobacteriales ampi R amox R Enterobacteriales (Order) Breakpoints
genus is Staphylococcus peni, cfox S ampi, amox, pipe, tica S Staphylococcus Breakpoints
genus is Staphylococcus peni, cfox R, S oxac, clox S Staphylococcus Breakpoints
genus is Staphylococcus cfox R all_betalactams R Staphylococcus Breakpoints
genus_species is Staphylococcus saprophyticus ampi S amox, amcl, pipe, pita S Staphylococcus Breakpoints
genus is Staphylococcus cfox S carbapenems, cephalosporins_without_cfta S Staphylococcus Breakpoints
genus is Staphylococcus cfox I carbapenems, cephalosporins_without_cfta I Staphylococcus Breakpoints
genus is Staphylococcus cfox R carbapenems, cephalosporins_without_cfta R Staphylococcus Breakpoints
genus is Staphylococcus norf S cipr, levo, moxi, oflo S Staphylococcus Breakpoints
genus is Staphylococcus eryt S azit, clar, roxi S Staphylococcus Breakpoints
genus is Staphylococcus eryt I azit, clar, roxi I Staphylococcus Breakpoints
genus is Staphylococcus eryt R azit, clar, roxi R Staphylococcus Breakpoints
genus is Staphylococcus tetr S doxy, mino S Staphylococcus Breakpoints
genus_species is Enterococcus faecium ampi R all_betalactams R Enterococcus Breakpoints
genus is Enterococcus ampi S amox, amcl, pipe, pita S Enterococcus Breakpoints
genus is Enterococcus ampi I amox, amcl, pipe, pita I Enterococcus Breakpoints
genus is Enterococcus ampi R amox, amcl, pipe, pita R Enterococcus Breakpoints
genus is Enterococcus norf S cipr, levo S Enterococcus Breakpoints
genus is Enterococcus norf I cipr, levo I Enterococcus Breakpoints
genus is Enterococcus norf R cipr, levo R Enterococcus Breakpoints
genus_species like ^Streptococcus (pyogenes|agalactiae|dysgalactiae|group A|group B|group C|group G)$ peni S aminopenicillins, ureidopenicillins, cephalosporins, carbapenems, clox, amcl S Streptococcus groups A, B, C, G Breakpoints
genus_species like ^Streptococcus (pyogenes|agalactiae|dysgalactiae|group A|group B|group C|group G)$ peni I aminopenicillins, ureidopenicillins, cephalosporins, carbapenems, clox, amcl I Streptococcus groups A, B, C, G Breakpoints
genus_species like ^Streptococcus (pyogenes|agalactiae|dysgalactiae|group A|group B|group C|group G)$ peni R aminopenicillins, ureidopenicillins, cephalosporins, carbapenems, clox, amcl R Streptococcus groups A, B, C, G Breakpoints
genus_species like ^Streptococcus (pyogenes|agalactiae|dysgalactiae|group A|group B|group C|group G)$ norf S levo, moxi S Streptococcus groups A, B, C, G Breakpoints
genus_species like ^Streptococcus (pyogenes|agalactiae|dysgalactiae|group A|group B|group C|group G)$ eryt S azit, clar, roxi S Streptococcus groups A, B, C, G Breakpoints
genus_species like ^Streptococcus (pyogenes|agalactiae|dysgalactiae|group A|group B|group C|group G)$ eryt I azit, clar, roxi I Streptococcus groups A, B, C, G Breakpoints
genus_species like ^Streptococcus (pyogenes|agalactiae|dysgalactiae|group A|group B|group C|group G)$ eryt R azit, clar, roxi R Streptococcus groups A, B, C, G Breakpoints
genus_species like ^Streptococcus (pyogenes|agalactiae|dysgalactiae|group A|group B|group C|group G)$ tetr S doxy, mino S Streptococcus groups A, B, C, G Breakpoints
genus_species is Streptococcus pneumoniae peni S ampi, amox, amcl, pipe, pita S Streptococcus pneumoniae Breakpoints
genus_species is Streptococcus pneumoniae ampi S amox, amcl, pipe, pita S Streptococcus pneumoniae Breakpoints
genus_species is Streptococcus pneumoniae ampi I amox, amcl, pipe, pita I Streptococcus pneumoniae Breakpoints
genus_species is Streptococcus pneumoniae ampi R amox, amcl, pipe, pita R Streptococcus pneumoniae Breakpoints
genus_species is Streptococcus pneumoniae norf S levo, moxi S Streptococcus pneumoniae Breakpoints
genus_species is Streptococcus pneumoniae eryt S azit, clar, roxi S Streptococcus pneumoniae Breakpoints
genus_species is Streptococcus pneumoniae eryt I azit, clar, roxi I Streptococcus pneumoniae Breakpoints
genus_species is Streptococcus pneumoniae eryt R azit, clar, roxi R Streptococcus pneumoniae Breakpoints
genus_species is Streptococcus pneumoniae tetr S doxy, mino S Streptococcus pneumoniae Breakpoints
genus_species like ^Streptococcus (australis|bovis|constellatus|cristatus|gallolyticus|gordonii|infantarius|infantis|mitis|mutans|oligofermentans|oralis|peroris|pseudopneumoniae|salivarius|sinensis|sobrinus|thermophilus|vestibularis|anginosus|equinus|intermedius|parasanguinis|sanguinis)$ peni S ampi, amox, amcl, pipe, pita S Viridans group streptococci Breakpoints
genus_species like ^Streptococcus (australis|bovis|constellatus|cristatus|gallolyticus|gordonii|infantarius|infantis|mitis|mutans|oligofermentans|oralis|peroris|pseudopneumoniae|salivarius|sinensis|sobrinus|thermophilus|vestibularis|anginosus|equinus|intermedius|parasanguinis|sanguinis)$ ampi S amox, amcl, pipe, pita S Viridans group streptococci Breakpoints
genus_species like ^Streptococcus (australis|bovis|constellatus|cristatus|gallolyticus|gordonii|infantarius|infantis|mitis|mutans|oligofermentans|oralis|peroris|pseudopneumoniae|salivarius|sinensis|sobrinus|thermophilus|vestibularis|anginosus|equinus|intermedius|parasanguinis|sanguinis)$ ampi I amox, amcl, pipe, pita I Viridans group streptococci Breakpoints
genus_species like ^Streptococcus (australis|bovis|constellatus|cristatus|gallolyticus|gordonii|infantarius|infantis|mitis|mutans|oligofermentans|oralis|peroris|pseudopneumoniae|salivarius|sinensis|sobrinus|thermophilus|vestibularis|anginosus|equinus|intermedius|parasanguinis|sanguinis)$ ampi R amox, amcl, pipe, pita R Viridans group streptococci Breakpoints
genus_species is Haemophilus influenzae ampi S amox, pipe S Haemophilus influenzae Breakpoints
genus_species is ^Haemophilus influenzae ampi I amox, pipe I Haemophilus influenzae Breakpoints
genus_species is Haemophilus influenzae ampi R amox, pipe R Haemophilus influenzae Breakpoints
genus_species is Haemophilus influenzae peni S ampi, amox, amcl, pipe, pita S Haemophilus influenzae Breakpoints
genus_species is Haemophilus influenzae amcl S pita S Haemophilus influenzae Breakpoints
genus_species is Haemophilus influenzae amcl I pita I Haemophilus influenzae Breakpoints
genus_species is Haemophilus influenzae amcl R pita R Haemophilus influenzae Breakpoints
genus_species is Haemophilus influenzae nali S cipr, levo, moxi, oflo S Haemophilus influenzae Breakpoints
genus_species is Haemophilus influenzae tetr S doxy, mino S Haemophilus influenzae Breakpoints
genus_species is Moraxella catarrhalis amcl S pita S Moraxella catarrhalis Breakpoints
genus_species is Moraxella catarrhalis amcl I pita I Moraxella catarrhalis Breakpoints
genus_species is Moraxella catarrhalis amcl R pita R Moraxella catarrhalis Breakpoints
genus_species is Moraxella catarrhalis nali S cipr, levo, moxi, oflo S Moraxella catarrhalis Breakpoints
genus_species is Moraxella catarrhalis eryt S azit, clar, roxi S Moraxella catarrhalis Breakpoints
genus_species is Moraxella catarrhalis eryt I azit, clar, roxi I Moraxella catarrhalis Breakpoints
genus_species is Moraxella catarrhalis eryt R azit, clar, roxi R Moraxella catarrhalis Breakpoints
genus_species is Moraxella catarrhalis tetr S doxy, mino S Moraxella catarrhalis Breakpoints
genus one_of Actinomyces, Bifidobacterium, Clostridium, Cutibacterium, Eggerthella, Eubacterium, Lactobacillus , Propionibacterium peni S ampi, amox, pipe, pita, tica S Anaerobic Gram positives Breakpoints
genus one_of Actinomyces, Bifidobacterium, Clostridium, Cutibacterium, Eggerthella, Eubacterium, Lactobacillus , Propionibacterium peni I ampi, amox, pipe, pita, tica I Anaerobic Gram positives Breakpoints
genus one_of Actinomyces, Bifidobacterium, Clostridium, Cutibacterium, Eggerthella, Eubacterium, Lactobacillus , Propionibacterium peni R ampi, amox, pipe, pita, tica R Anaerobic Gram positives Breakpoints
genus one_of Bacteroides, Bilophila , Fusobacterium, Mobiluncus, Porphyromonas, Prevotella peni S ampi, amox, pipe, pita, tica S Anaerobic Gram negatives Breakpoints
genus one_of Bacteroides, Bilophila , Fusobacterium, Mobiluncus, Porphyromonas, Prevotella peni I ampi, amox, pipe, pita, tica I Anaerobic Gram negatives Breakpoints
genus one_of Bacteroides, Bilophila , Fusobacterium, Mobiluncus, Porphyromonas, Prevotella peni R ampi, amox, pipe, pita, tica R Anaerobic Gram negatives Breakpoints
genus_species is Pasteurella multocida peni S ampi, amox S Pasteurella multocida Breakpoints
genus_species is Pasteurella multocida peni I ampi, amox I Pasteurella multocida Breakpoints
genus_species is Pasteurella multocida peni R ampi, amox R Pasteurella multocida Breakpoints
genus_species is Campylobacter coli eryt S azit, clar S Campylobacter coli Breakpoints
genus_species is Campylobacter coli eryt I azit, clar I Campylobacter coli Breakpoints
genus_species is Campylobacter coli eryt R azit, clar R Campylobacter coli Breakpoints
genus_species is Campylobacter coli tetr S doxy S Campylobacter coli Breakpoints
genus_species is Campylobacter coli tetr I doxy I Campylobacter coli Breakpoints
genus_species is Campylobacter coli tetr R doxy R Campylobacter coli Breakpoints
genus_species is Campylobacter jejuni eryt S azit, clar S Campylobacter jejuni Breakpoints
genus_species is Campylobacter jejuni eryt I azit, clar I Campylobacter jejuni Breakpoints
genus_species is Campylobacter jejuni eryt R azit, clar R Campylobacter jejuni Breakpoints
genus_species is Campylobacter jejuni tetr S doxy S Campylobacter jejuni Breakpoints
genus_species is Campylobacter jejuni tetr I doxy I Campylobacter jejuni Breakpoints
genus_species is Campylobacter jejuni tetr R doxy R Campylobacter jejuni Breakpoints
genus_species is Aerococcus sanguinicola norf S fluoroquinolones S Aerococcus sanguinicola Breakpoints
genus_species is Aerococcus sanguinicola norf I fluoroquinolones I Aerococcus sanguinicola Breakpoints
genus_species is Aerococcus sanguinicola norf R fluoroquinolones R Aerococcus sanguinicola Breakpoints
genus_species is Aerococcus sanguinicola cipr S levo S Aerococcus sanguinicola Breakpoints
genus_species is Aerococcus sanguinicola cipr I levo I Aerococcus sanguinicola Breakpoints
genus_species is Aerococcus sanguinicola cipr R levo R Aerococcus urinae Breakpoints
genus_species is Aerococcus urinae norf S fluoroquinolones S Aerococcus urinae Breakpoints
genus_species is Aerococcus urinae norf I fluoroquinolones I Aerococcus urinae Breakpoints
genus_species is Aerococcus urinae norf R fluoroquinolones R Aerococcus urinae Breakpoints
genus_species is Aerococcus urinae cipr S levo S Aerococcus urinae Breakpoints
genus_species is Aerococcus urinae cipr I levo I Aerococcus urinae Breakpoints
genus_species is Aerococcus urinae cipr R levo R Aerococcus urinae Breakpoints
genus_species is Kingella kingae peni S ampi, amox S Kingella kingae Breakpoints
genus_species is Kingella kingae peni I ampi, amox I Kingella kingae Breakpoints
genus_species is Kingella kingae peni R ampi, amox R Kingella kingae Breakpoints
genus_species is Kingella kingae eryt S azit, clar S Kingella kingae Breakpoints
genus_species is Kingella kingae eryt I azit, clar I Kingella kingae Breakpoints
genus_species is Kingella kingae eryt R azit, clar R Kingella kingae Breakpoints
genus_species is Kingella kingae tetr S doxy S Kingella kingae Breakpoints
family is Enterobacteriaceae peni, glycopeptides, fusi, macrolides, linc, streptogramins, rifa, dapt, line R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
fullname like ^Citrobacter (koseri|amalonaticus|sedlakii|farmeri|rodentium) aminopenicillins, tica R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
fullname like ^Citrobacter (freundii|braakii|murliniae|werkmanii|youngae) aminopenicillins, amcl, czol, cfox R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Enterobacter cloacae aminopenicillins, amcl, czol, cfox R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Enterobacter aerogenes aminopenicillins, amcl, czol, cfox R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Escherichia hermanni aminopenicillins, tica R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Hafnia alvei aminopenicillins, amcl, czol, cfox R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus is Klebsiella aminopenicillins, tica R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Morganella morganii aminopenicillins, amcl, czol, tetracyclines, polymyxins, nitr R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Proteus mirabilis tetracyclines, tige, polymyxins, nitr R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Proteus penneri aminopenicillins, czol, cfur, tetracyclines, tige, polymyxins, nitr R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Proteus vulgaris aminopenicillins, czol, cfur, tetracyclines, tige, polymyxins, nitr R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Providencia rettgeri aminopenicillins, amcl, czol, cfur, tetracyclines, tige, polymyxins, nitr R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Providencia stuartii aminopenicillins, amcl, czol, cfur, tetracyclines, tige, polymyxins, nitr R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus is Raoultella aminopenicillins, tica R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Serratia marcescens aminopenicillins, amcl, czol, cfox, cfur, tetracyclines[tetracyclines != na.rm(mino)], polymyxins, nitr R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Yersinia enterocolitica aminopenicillins, amcl, tica, czol, cfox R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus_species is Yersinia pseudotuberculosis poly, coli R Table 01: Intrinsic resistance in Enterobacteriaceae Expert Rules
genus one_of Achromobacter, Acinetobacter, Alcaligenes, Bordatella, Burkholderia, Elizabethkingia, Flavobacterium, Ochrobactrum, Pseudomonas, Stenotrophomonas peni, cfox, cfur, glycopeptides, fusi, macrolides, linc, streptogramins, rifa, dapt, line R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus_species is Acinetobacter baumannii aminopenicillins, amcl, czol, cfot, cftr, aztr, erta, trim, fosf, doxy, tetr R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus_species is Acinetobacter pittii aminopenicillins, amcl, czol, cfot, cftr, aztr, erta, trim, fosf, doxy, tetr R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus_species is Acinetobacter nosocomialis aminopenicillins, amcl, czol, cfot, cftr, aztr, erta, trim, fosf, doxy, tetr R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus_species is Acinetobacter calcoaceticus aminopenicillins, amcl, czol, cfot, cftr, aztr, erta, trim, fosf, doxy, tetr R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus_species is Achromobacter xylosoxidans aminopenicillins, czol, cfot, cftr, erta R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
fullname like ^Burkholderia (cepacia|multivorans|cenocepacia|stabilis|vietnamiensis|dolosa|ambifaria|anthina|pyrrocinia|ubonensis) aminopenicillins, amcl, tica, pipe, pita, czol, cfot, cftr, aztr, erta, cipr, chlo, aminoglycosides, trim, fosf, polymyxins R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus_species is Elizabethkingia meningoseptica aminopenicillins, amcl, tica, czol, cfot, cftr, cfta, cfep, aztr, erta, imip, mero, polymyxins R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus_species is Ochrobactrum anthropi aminopenicillins, amcl, tica, pipe, pita, czol, cfot, cftr, cfta, cfep, aztr, erta R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus_species is Pseudomonas aeruginosa aminopenicillins, amcl, czol, cfot, cftr, erta, chlo, kana, neom, trim, trsu, tetracyclines, tige R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus_species is Stenotrophomonas maltophilia aminopenicillins, amcl, tica, pipe, pita, czol, cfot, cftr, cfta, aztr, erta, imip, mero, aminoglycosides, trim, fosf, tetr R Table 02: Intrinsic resistance in non-fermentative Gram-negative bacteria Expert Rules
genus one_of Haemophilus, Moraxella, Neisseria, Campylobacter glycopeptides, linc, dapt, line R Table 03: Intrinsic resistance in other Gram-negative bacteria Expert Rules
genus_species is Haemophilus influenzae fusi, streptogramins R Table 03: Intrinsic resistance in other Gram-negative bacteria Expert Rules
genus_species is Moraxella catarrhalis trim R Table 03: Intrinsic resistance in other Gram-negative bacteria Expert Rules
genus is Neisseria trim R Table 03: Intrinsic resistance in other Gram-negative bacteria Expert Rules
genus_species is Campylobacter fetus fusi, streptogramins, trim, nali R Table 03: Intrinsic resistance in other Gram-negative bacteria Expert Rules
genus_species is Campylobacter jejuni fusi, streptogramins, trim R Table 03: Intrinsic resistance in other Gram-negative bacteria Expert Rules
genus_species is Campylobacter coli fusi, streptogramins, trim R Table 03: Intrinsic resistance in other Gram-negative bacteria Expert Rules
gramstain is Gram positive aztr, polymyxins, nali R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus saprophyticus fusi, cfta, fosf, novo R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus cohnii cfta, novo R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus xylosus cfta, novo R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus capitis cfta, fosf R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus aureus cfta R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus epidermidis cfta R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus coagulase-negative cfta R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus hominis cfta R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus haemolyticus cfta R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus intermedius cfta R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Staphylococcus pseudintermedius cfta R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
cfta streptococci
2019-04-09 10:34:40 +02:00
genus is Streptococcus fusi, cfta, aminoglycosides R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
new EUCAST rules algorithm
2019-04-05 18:47:39 +02:00
genus_species is Enterococcus faecalis fusi, cfta, cephalosporins_without_cfta, aminoglycosides, macrolides, clin, qida, trim, trsu R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Enterococcus gallinarum fusi, cfta, cephalosporins_without_cfta, aminoglycosides, macrolides, clin, qida, vanc, trim, trsu R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Enterococcus casseliflavus fusi, cfta, cephalosporins_without_cfta, aminoglycosides, macrolides, clin, qida, vanc, trim, trsu R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Enterococcus faecium fusi, cfta, cephalosporins_without_cfta, aminoglycosides, macrolides, trim, trsu R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus is Corynebacterium fosf R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Listeria monocytogenes cephalosporins R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus is Leuconostoc, Pediococcus glycopeptides R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus is Lactobacillus glycopeptides R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Clostridium ramosum vanc R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species is Clostridium innocuum vanc R Table 04: Intrinsic resistance in Gram-positive bacteria Expert Rules
genus_species like ^Streptococcus (pyogenes|agalactiae|dysgalactiae|group A|group B|group C|group G) peni S aminopenicillins, cephalosporins, carbapenems S Table 08: Interpretive rules for B-lactam agents and Gram-positive cocci Expert Rules
genus is Enterococcus ampi R ureidopenicillins, carbapenems R Table 08: Interpretive rules for B-lactam agents and Gram-positive cocci Expert Rules
genus is Enterococcus amox R ureidopenicillins, carbapenems R Table 08: Interpretive rules for B-lactam agents and Gram-positive cocci Expert Rules
family is Enterobacteriaceae tica, pipe R, S pipe R Table 09: Interpretive rules for B-lactam agents and Gram-negative rods Expert Rules
genus is .* eryt S azit, clar S Table 11: Interpretive rules for macrolides, lincosamides, and streptogramins Expert Rules
genus is .* eryt I azit, clar I Table 11: Interpretive rules for macrolides, lincosamides, and streptogramins Expert Rules
genus is .* eryt R azit, clar R Table 11: Interpretive rules for macrolides, lincosamides, and streptogramins Expert Rules
genus is Staphylococcus tobr R kana, amik R Table 12: Interpretive rules for aminoglycosides Expert Rules
genus is Staphylococcus gent R aminoglycosides R Table 12: Interpretive rules for aminoglycosides Expert Rules
family is Enterobacteriaceae gent, tobr I, S gent R Table 12: Interpretive rules for aminoglycosides Expert Rules
family is Enterobacteriaceae gent, tobr R, I tobr R Table 12: Interpretive rules for aminoglycosides Expert Rules
genus is Staphylococcus moxi R fluoroquinolones R Table 13: Interpretive rules for quinolones Expert Rules
genus_species is Streptococcus pneumoniae moxi R fluoroquinolones R Table 13: Interpretive rules for quinolones Expert Rules
family is Enterobacteriaceae cipr R fluoroquinolones R Table 13: Interpretive rules for quinolones Expert Rules
genus_species is Neisseria gonorrhoeae cipr R fluoroquinolones R Table 13: Interpretive rules for quinolones Expert Rules
genus is .* amcl R ampi, amox R Non-EUCAST: ampicillin = R where amoxicillin/clav acid = R Other rules
genus is .* pita R pipe R Non-EUCAST: piperacillin = R where piperacillin/tazobactam = R Other rules
genus is .* trsu R trim R Non-EUCAST: trimethoprim = R where trimethoprim/sulfa = R Other rules
genus is .* ampi S amcl S Non-EUCAST: amoxicillin/clav acid = S where ampicillin = S Other rules
genus is .* amox S amcl S Non-EUCAST: amoxicillin/clav acid = S where ampicillin = S Other rules
genus is .* pipe S pita S Non-EUCAST: piperacillin/tazobactam = S where piperacillin = S Other rules
genus is .* trim S trsu S Non-EUCAST: trimethoprim/sulfa = S where trimethoprim = S Other rules
Copy Permalink