2022-08-21 16:59:35 +02:00
<!DOCTYPE html>
2024-11-21 10:17:08 +01:00
<!-- Generated by pkgdown: do not edit by hand --> < html lang = "en" > < head > < meta http-equiv = "Content-Type" content = "text/html; charset=UTF-8" > < meta charset = "utf-8" > < meta http-equiv = "X-UA-Compatible" content = "IE=edge" > < meta name = "viewport" content = "width=device-width, initial-scale=1, shrink-to-fit=no" > < title > Authors and Citation • AMR (for R)< / title > <!-- favicons --> < link rel = "icon" type = "image/png" sizes = "16x16" href = "favicon-16x16.png" > < link rel = "icon" type = "image/png" sizes = "32x32" href = "favicon-32x32.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "180x180" href = "apple-touch-icon.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "120x120" href = "apple-touch-icon-120x120.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "76x76" href = "apple-touch-icon-76x76.png" > < link rel = "apple-touch-icon" type = "image/png" sizes = "60x60" href = "apple-touch-icon-60x60.png" > < script src = "deps/jquery-3.6.0/jquery-3.6.0.min.js" > < / script > < meta name = "viewport" content = "width=device-width, initial-scale=1, shrink-to-fit=no" > < link href = "deps/bootstrap-5.3.1/bootstrap.min.css" rel = "stylesheet" > < script src = "deps/bootstrap-5.3.1/bootstrap.bundle.min.js" > < / script > < link href = "deps/Lato-0.4.9/font.css" rel = "stylesheet" > < link href = "deps/Fira_Code-0.4.9/font.css" rel = "stylesheet" > < link href = "deps/font-awesome-6.5.2/css/all.min.css" rel = "stylesheet" > < link href = "deps/font-awesome-6.5.2/css/v4-shims.min.css" rel = "stylesheet" > < script src = "deps/headroom-0.11.0/headroom.min.js" > < / script > < script src = "deps/headroom-0.11.0/jQuery.headroom.min.js" > < / script > < script src = "deps/bootstrap-toc-1.0.1/bootstrap-toc.min.js" > < / script > < script src = "deps/clipboard.js-2.0.11/clipboard.min.js" > < / script > < script src = "deps/search-1.0.0/autocomplete.jquery.min.js" > < / script > < script src = "deps/search-1.0.0/fuse.min.js" > < / script > < script src = "deps/search-1.0.0/mark.min.js" > < / script > <!-- pkgdown --> < script src = "pkgdown.js" > < / script > < link href = "extra.css" rel = "stylesheet" > < script src = "extra.js" > < / script > < meta property = "og:title" content = "Authors and Citation" > < meta property = "og:image" content = "https://msberends.github.io/AMR/logo.svg" > < / head > < body >
2022-08-21 16:59:35 +02:00
< a href = "#main" class = "visually-hidden-focusable" > Skip to contents< / a >
2024-07-16 15:00:55 +02:00
< nav class = "navbar navbar-expand-lg fixed-top bg-primary" data-bs-theme = "dark" aria-label = "Site navigation" > < div class = "container" >
2022-08-21 16:59:35 +02:00
< a class = "navbar-brand me-2" href = "index.html" > AMR (for R)< / a >
2024-12-15 20:39:38 +01:00
< small class = "nav-text text-muted me-auto" data-bs-toggle = "tooltip" data-bs-placement = "bottom" title = "" > 2.1.1.9120< / small >
2024-07-16 15:00:55 +02:00
2022-08-21 16:59:35 +02:00
< button class = "navbar-toggler" type = "button" data-bs-toggle = "collapse" data-bs-target = "#navbar" aria-controls = "navbar" aria-expanded = "false" aria-label = "Toggle navigation" >
< span class = "navbar-toggler-icon" > < / span >
< / button >
< div id = "navbar" class = "collapse navbar-collapse ms-3" >
2023-05-24 16:03:18 +02:00
< ul class = "navbar-nav me-auto" > < li class = "nav-item dropdown" >
2024-07-16 15:00:55 +02:00
< button class = "nav-link dropdown-toggle" type = "button" id = "dropdown-how-to" data-bs-toggle = "dropdown" aria-expanded = "false" aria-haspopup = "true" > < span class = "fa fa-question-circle" > < / span > How to< / button >
< ul class = "dropdown-menu" aria-labelledby = "dropdown-how-to" > < li > < a class = "dropdown-item" href = "articles/AMR.html" > < span class = "fa fa-directions" > < / span > Conduct AMR Analysis< / a > < / li >
< li > < a class = "dropdown-item" href = "reference/antibiogram.html" > < span class = "fa fa-file-prescription" > < / span > Generate Antibiogram (Trad./Syndromic/WISCA)< / a > < / li >
< li > < a class = "dropdown-item" href = "articles/resistance_predict.html" > < span class = "fa fa-dice" > < / span > Predict Antimicrobial Resistance< / a > < / li >
< li > < a class = "dropdown-item" href = "articles/datasets.html" > < span class = "fa fa-database" > < / span > Download Data Sets for Own Use< / a > < / li >
< li > < a class = "dropdown-item" href = "reference/AMR-options.html" > < span class = "fa fa-gear" > < / span > Set User- Or Team-specific Package Settings< / a > < / li >
< li > < a class = "dropdown-item" href = "articles/PCA.html" > < span class = "fa fa-compress" > < / span > Conduct Principal Component Analysis for AMR< / a > < / li >
< li > < a class = "dropdown-item" href = "articles/MDR.html" > < span class = "fa fa-skull-crossbones" > < / span > Determine Multi-Drug Resistance (MDR)< / a > < / li >
< li > < a class = "dropdown-item" href = "articles/WHONET.html" > < span class = "fa fa-globe-americas" > < / span > Work with WHONET Data< / a > < / li >
< li > < a class = "dropdown-item" href = "articles/EUCAST.html" > < span class = "fa fa-exchange-alt" > < / span > Apply Eucast Rules< / a > < / li >
< li > < a class = "dropdown-item" href = "reference/mo_property.html" > < span class = "fa fa-bug" > < / span > Get Taxonomy of a Microorganism< / a > < / li >
< li > < a class = "dropdown-item" href = "reference/ab_property.html" > < span class = "fa fa-capsules" > < / span > Get Properties of an Antibiotic Drug< / a > < / li >
< li > < a class = "dropdown-item" href = "reference/av_property.html" > < span class = "fa fa-capsules" > < / span > Get Properties of an Antiviral Drug< / a > < / li >
< / ul > < / li >
2024-09-30 22:12:21 +02:00
< li class = "nav-item" > < a class = "nav-link" href = "articles/AMR_for_Python.html" > < span class = "fa fab fa-python" > < / span > AMR for Python< / a > < / li >
2024-07-16 15:00:55 +02:00
< li class = "nav-item" > < a class = "nav-link" href = "reference/index.html" > < span class = "fa fa-book-open" > < / span > Manual< / a > < / li >
< li class = "active nav-item" > < a class = "nav-link" href = "authors.html" > < span class = "fa fa-users" > < / span > Authors< / a > < / li >
< / ul > < ul class = "navbar-nav" > < li class = "nav-item" > < a class = "nav-link" href = "news/index.html" > < span class = "fa far fa-newspaper" > < / span > Changelog< / a > < / li >
< li class = "nav-item" > < a class = "external-link nav-link" href = "https://github.com/msberends/AMR" > < span class = "fa fab fa-github" > < / span > Source Code< / a > < / li >
2022-08-21 16:59:35 +02:00
< / ul > < / div >
2024-07-16 15:00:55 +02:00
2022-08-21 16:59:35 +02:00
< / div >
< / nav > < div class = "container template-citation-authors" >
< div class = "row" >
< main id = "main" class = "col-md-9" > < div class = "page-header" >
< img src = "logo.svg" class = "logo" alt = "" > < h1 > Authors and Citation< / h1 >
< / div >
2024-07-16 15:00:55 +02:00
< div class = "section level2" >
2022-08-21 16:59:35 +02:00
< h2 > Authors< / h2 >
2024-07-16 15:00:55 +02:00
2022-08-21 16:59:35 +02:00
< ul class = "list-unstyled" > < li >
< p > < strong > Matthijs S. Berends< / strong > . Author, maintainer. < a href = "https://orcid.org/0000-0001-7620-1800" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
< / p >
< / li >
< li >
< p > < strong > Dennis Souverein< / strong > . Author, contributor. < a href = "https://orcid.org/0000-0003-0455-0336" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
< / p >
< / li >
< li >
2024-07-16 15:00:55 +02:00
< p > < strong > Erwin E. A. Hassing< / strong > . Author, contributor.
2022-08-21 16:59:35 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Andrew P. Norgan< / strong > . Contributor. < a href = "https://orcid.org/0000-0002-2955-2066" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-21 16:59:35 +02:00
< / p >
< / li >
2024-09-29 22:25:53 +02:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Anita Williams< / strong > . Contributor. < a href = "https://orcid.org/0000-0002-5295-8451" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2024-09-29 22:25:53 +02:00
< / p >
< / li >
2022-08-21 16:59:35 +02:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Annick Lenglet< / strong > . Contributor. < a href = "https://orcid.org/0000-0003-2013-8405" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-21 16:59:35 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Anthony Underwood< / strong > . Contributor. < a href = "https://orcid.org/0000-0002-8547-4277" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-21 16:59:35 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Anton Mymrikov< / strong > . Contributor.
2022-08-21 16:59:35 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Bart C. Meijer< / strong > . Contributor.
2022-08-21 16:59:35 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Christian F. Luz< / strong > . Contributor. < a href = "https://orcid.org/0000-0001-5809-5995" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-21 16:59:35 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Dmytro Mykhailenko< / strong > . Contributor.
2022-08-21 16:59:35 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Eric H. L. C. M. Hazenberg< / strong > . Contributor.
2022-08-21 16:59:35 +02:00
< / p >
< / li >
2024-02-24 18:58:43 +01:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Gwen Knight< / strong > . Contributor. < a href = "https://orcid.org/0000-0002-7263-9896" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2024-02-24 18:58:43 +01:00
< / p >
< / li >
2022-08-21 16:59:35 +02:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Jason Stull< / strong > . Contributor. < a href = "https://orcid.org/0000-0002-9028-8153" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-28 22:45:38 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Javier Sanchez< / strong > . Contributor. < a href = "https://orcid.org/0000-0003-2605-8094" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-21 16:59:35 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Jonas Salm< / strong > . Contributor.
2022-08-21 16:59:35 +02:00
< / p >
< / li >
2023-01-12 23:23:33 +01:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Judith M. Fonville< / strong > . Contributor.
2023-01-12 23:23:33 +01:00
< / p >
< / li >
2022-08-21 16:59:35 +02:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Larisse Bolton< / strong > . Contributor. < a href = "https://orcid.org/0000-0001-7879-2173" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-21 16:59:35 +02:00
< / p >
< / li >
2024-02-24 18:58:43 +01:00
< li >
2024-07-16 15:00:55 +02:00
< p > < strong > Matthew Saab< / strong > . Contributor.
2024-02-24 18:58:43 +01:00
< / p >
< / li >
2022-10-21 22:03:48 +02:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Peter Dutey-Magni< / strong > . Contributor. < a href = "https://orcid.org/0000-0002-8942-9836" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-10-21 22:03:48 +02:00
< / p >
< / li >
2024-02-24 18:58:43 +01:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Rogier P. Schade< / strong > . Contributor.
2024-02-24 18:58:43 +01:00
< / p >
< / li >
2022-08-21 16:59:35 +02:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Sofia Ny< / strong > . Contributor. < a href = "https://orcid.org/0000-0002-2017-1363" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-21 16:59:35 +02:00
< / p >
< / li >
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Alex W. Friedrich< / strong > . Thesis advisor. < a href = "https://orcid.org/0000-0003-4881-038X" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-21 16:59:35 +02:00
< / p >
< / li >
2024-02-24 18:58:43 +01:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Bhanu N. M. Sinha< / strong > . Thesis advisor. < a href = "https://orcid.org/0000-0003-1634-0010" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2024-02-24 18:58:43 +01:00
< / p >
< / li >
2022-08-21 16:59:35 +02:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Casper J. Albers< / strong > . Thesis advisor. < a href = "https://orcid.org/0000-0002-9213-6743" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2022-08-21 16:59:35 +02:00
< / p >
< / li >
2023-02-10 16:26:36 +01:00
< li >
2024-12-09 14:50:15 +01:00
< p > < strong > Corinna Glasner< / strong > . Thesis advisor. < a href = "https://orcid.org/0000-0003-1241-1328" target = "orcid.widget" aria-label = "ORCID" class = "external-link" > < span class = "fab fa-orcid orcid" aria-hidden = "true" > < / span > < / a >
2023-02-10 16:26:36 +01:00
< / p >
< / li >
2022-08-21 16:59:35 +02:00
< / ul > < / div >
2024-07-16 15:00:55 +02:00
< div class = "section level2" >
2022-08-21 16:59:35 +02:00
< h2 id = "citation" > Citation< / h2 >
2024-07-16 15:00:55 +02:00
< p > < small class = "dont-index" > Source: < a href = "https://github.com/msberends/AMR/blob/main/inst/CITATION" class = "external-link" > < code > inst/CITATION< / code > < / a > < / small > < / p >
2022-08-21 16:59:35 +02:00
2022-10-05 12:32:07 +02:00
< p > Berends MS, Luz CF, Friedrich AW, Sinha BNM, Albers CJ, Glasner C (2022).
“AMR: An R Package for Working with Antimicrobial Resistance Data.”
< em > Journal of Statistical Software< / em > , < b > 104< / b > (3), 1–
2024-07-16 15:00:55 +02:00
< a href = "https://doi.org/10.18637/jss.v104.i03" class = "external-link" > doi:10.18637/jss.v104.i03< / a > .
2022-10-05 12:32:07 +02:00
< / p >
2022-08-21 16:59:35 +02:00
< pre > @Article{,
2022-10-05 12:32:07 +02:00
title = {{AMR}: An {R} Package for Working with Antimicrobial Resistance Data},
author = {Matthijs S. Berends and Christian F. Luz and Alexander W. Friedrich and Bhanu N. M. Sinha and Casper J. Albers and Corinna Glasner},
2022-08-21 16:59:35 +02:00
journal = {Journal of Statistical Software},
2022-10-05 12:32:07 +02:00
year = {2022},
volume = {104},
number = {3},
pages = {1--31},
doi = {10.18637/jss.v104.i03},
2022-08-21 16:59:35 +02:00
}< / pre >
< / div >
2024-07-16 15:00:55 +02:00
< / main > < aside class = "col-md-3" > < nav id = "toc" aria-label = "Table of contents" > < h2 > On this page< / h2 >
2022-08-21 16:59:35 +02:00
< / nav > < / aside > < / div >
< footer > < div class = "pkgdown-footer-left" >
2024-04-23 10:39:01 +02:00
< p > < code > AMR< / code > (for R). Free and open-source, licenced under the < a target = "_blank" href = "https://github.com/msberends/AMR/blob/main/LICENSE" class = "external-link" > GNU General Public License version 2.0 (GPL-2)< / a > .< br > Developed at the < a target = "_blank" href = "https://www.rug.nl" class = "external-link" > University of Groningen< / a > and < a target = "_blank" href = "https://www.umcg.nl" class = "external-link" > University Medical Center Groningen< / a > in The Netherlands.< / p >
2022-08-21 16:59:35 +02:00
< / div >
< div class = "pkgdown-footer-right" >
2024-09-19 14:48:19 +02:00
< p > < a target = "_blank" href = "https://www.rug.nl" class = "external-link" > < img src = "https://github.com/msberends/AMR/raw/main/pkgdown/assets/logo_rug.svg" style = "max-width: 150px;" > < / a > < a target = "_blank" href = "https://www.umcg.nl" class = "external-link" > < img src = "https://github.com/msberends/AMR/raw/main/pkgdown/assets/logo_umcg.svg" style = "max-width: 150px;" > < / a > < / p >
2022-08-21 16:59:35 +02:00
< / div >
< / footer > < / div >
2024-07-16 15:00:55 +02:00
2022-08-21 16:59:35 +02:00
< / body > < / html >
