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< h1 > Calculate resistance of isolates< / h1 >
< div class = "hidden name" > < code > rsi.Rd< / code > < / div >
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< p > This function is deprecated. Use the < code > < a href = 'portion.html' > portion< / a > < / code > functions instead.< / p >
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< pre class = "usage" > < span class = 'fu' > rsi< / span > (< span class = 'no' > ab1< / span > , < span class = 'kw' > ab2< / span > < span class = 'kw' > =< / span > < span class = 'kw' > NULL< / span > , < span class = 'kw' > interpretation< / span > < span class = 'kw' > =< / span > < span class = 'st' > "IR"< / span > , < span class = 'kw' > minimum< / span > < span class = 'kw' > =< / span > < span class = 'fl' > 30< / span > ,
< span class = 'kw' > as_percent< / span > < span class = 'kw' > =< / span > < span class = 'fl' > FALSE< / span > , < span class = 'no' > ...< / span > )< / pre >
< h2 class = "hasAnchor" id = "arguments" > < a class = "anchor" href = "#arguments" > < / a > Arguments< / h2 >
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< th > ab1, ab2< / th >
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< td > < p > vector (or column) with antibiotic interpretations. It will be transformed internally with < code > < a href = 'as.rsi.html' > as.rsi< / a > < / code > if needed.< / p > < / td >
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< / tr >
< tr >
< th > interpretation< / th >
< td > < p > antimicrobial interpretation to check for< / p > < / td >
< / tr >
< tr >
< th > minimum< / th >
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< td > < p > the minimum allowed number of available (tested) isolates. Any isolate count lower than < code > minimum< / code > will return < code > NA< / code > with a warning. The default number of < code > 30< / code > isolates is advised by the Clinical and Laboratory Standards Institute (CLSI) as best practice, see Source.< / p > < / td >
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< / tr >
< tr >
< th > as_percent< / th >
< td > < p > a logical to indicate whether the output must be returned as a hundred fold with % sign (a character). A value of < code > 0.123456< / code > will then be returned as < code > "12.3%"< / code > .< / p > < / td >
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< th > ...< / th >
< td > < p > deprecated parameters to support usage on older versions< / p > < / td >
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< p > Developed by < a href = 'https://www.rug.nl/staff/m.s.berends/' > Matthijs S. Berends< / a > , < a href = 'https://www.rug.nl/staff/c.f.luz/' > Christian F. Luz< / a > , < a href = 'https://www.rug.nl/staff/c.glasner/' > Corinna Glasner< / a > , < a href = 'https://www.rug.nl/staff/a.w.friedrich/' > Alex W. Friedrich< / a > , < a href = 'https://www.rug.nl/staff/b.sinha/' > Bhanu N. M. Sinha< / a > .< / p >
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