AMR/tests/testthat/test-g.test.R

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context("g.test.R")
test_that("G-test works", {
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# GOODNESS-OF-FIT
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# example 1: clearfield rice vs. red rice
x <- c(772, 1611, 737)
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x.expected <- ratio(x, ratio = "1:2:1")
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expect_equal(g.test(x, p = c(0.25, 0.50, 0.25))$p.value,
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expected = 0.12574,
tolerance = 0.00001)
# example 2: red crossbills
x <- c(1752, 1895)
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x.expected <- ratio(x, c(1, 1))
expect_equal(g.test(x)$p.value,
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expected = 0.01787343,
tolerance = 0.00000001)
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# INDEPENDENCE
x <- matrix(data = round(runif(4) * 100000, 0),
ncol = 2,
byrow = TRUE)
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expect_lt(g.test(x)$p.value,
1)
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expect_warning(g.test(x = c(772, 1611, 737),
y = c(780, 1560, 780),
rescale.p = TRUE))
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})