AMR/man/rsi_translation.Rd

% Generated by roxygen2: do not edit by hand
% Please edit documentation in R/data.R
\docType{data}
\name{rsi_translation}
\alias{rsi_translation}
\title{Data set for RSI interpretation}
\format{A \code{\link{data.frame}} with 11,559 observations and 9 variables:
\describe{
  \item{\code{guideline}}{Name of the guideline}
  \item{\code{mo}}{Microbial ID, see \code{\link{as.mo}}}
  \item{\code{ab}}{Antibiotic ID, see \code{\link{as.ab}}}
  \item{\code{ref_tbl}}{Info about where the guideline rule can be found}
  \item{\code{S_mic}}{Lowest MIC value that leads to "S"}
  \item{\code{R_mic}}{Highest MIC value that leads to "R"}
  \item{\code{dose_disk}}{Dose of the used disk diffusion method}
  \item{\code{S_disk}}{Lowest number of millimeters that leads to "S"}
  \item{\code{R_disk}}{Highest number of millimeters that leads to "R"}
}}
\usage{
rsi_translation
}
\description{
Data set to interpret MIC and disk diffusion to RSI values. Included guidelines are CLSI (2011-2019) and EUCAST (2011-2019). Use \code{\link{as.rsi}} to transform MICs or disks measurements to RSI values.
}
\section{Read more on our website!}{

On our website \url{https://msberends.gitlab.io/AMR} you can find \href{https://msberends.gitlab.io/AMR/articles/AMR.html}{a tutorial} about how to conduct AMR analysis, the \href{https://msberends.gitlab.io/AMR/reference}{complete documentation of all functions} (which reads a lot easier than here in R) and \href{https://msberends.gitlab.io/AMR/articles/WHONET.html}{an example analysis using WHONET data}.
}

\keyword{datasets}