AMR/.travis.yml

# R for travis: see documentation at https://docs.travis-ci.com/user/languages/r

# Setting up R deps
language: r
r: 3.2
r_packages:
  - covr
  - testthat
  - dplyr
  - rvest
  - xml2
  - reshape2

# system deps
os:
  - linux
  - osx
install:
  - if [ $TRAVIS_OS_NAME = linux ]; then sudo apt-get -qq update; fi
  - if [ $TRAVIS_OS_NAME = linux ]; then sudo apt-get install -y xclip; fi
  - if [ $TRAVIS_OS_NAME = osx ]; then brew install xclip; fi

# postrun
after_success:
  - Rscript -e 'covr::codecov()'
notifications:
  email:
    recipients:
      - m.s.berends@umcg.nl
      - c.f.luz@umcg.nl
    on_success: change
    on_failure: change
- Added new function `guess_bactid` to determine the ID of a microorganism based on genus/species - Renamed `ablist` to `antibiotics` - Added support for character vector in join functions - Altered `%like%` to make it case insensitive 2018-03-19 12:43:22 +01:00			`# R for travis: see documentation at https://docs.travis-ci.com/user/languages/r`

Update .travis.yml 2018-03-29 12:56:03 +02:00			`# Setting up R deps`
Create .travis.yml 2018-03-11 21:00:11 +01:00			`language: r`
Update .travis.yml 2018-03-29 12:56:03 +02:00			`r: 3.2`
Update .travis.yml 2018-03-29 15:17:48 +02:00			`r_packages:`
			`- covr`
			`- testthat`
			`- dplyr`
			`- rvest`
			`- xml2`
			`- reshape2`
- Added new function `guess_bactid` to determine the ID of a microorganism based on genus/species - Renamed `ablist` to `antibiotics` - Added support for character vector in join functions - Altered `%like%` to make it case insensitive 2018-03-19 12:43:22 +01:00
Update .travis.yml 2018-03-29 12:56:03 +02:00			`# system deps`
Test on Linux and Mac 2018-03-23 14:59:50 +01:00			`os:`
			`- linux`
			`- osx`
Update .travis.yml 2018-03-29 13:16:08 +02:00			`install:`
			`- if [ $TRAVIS_OS_NAME = linux ]; then sudo apt-get -qq update; fi`
			`- if [ $TRAVIS_OS_NAME = linux ]; then sudo apt-get install -y xclip; fi`
Update .travis.yml 2018-03-29 14:07:54 +02:00			`- if [ $TRAVIS_OS_NAME = osx ]; then brew install xclip; fi`
Test on Linux and Mac 2018-03-23 14:59:50 +01:00
Update .travis.yml 2018-03-29 12:56:03 +02:00			`# postrun`
- Added new function `guess_bactid` to determine the ID of a microorganism based on genus/species - Renamed `ablist` to `antibiotics` - Added support for character vector in join functions - Altered `%like%` to make it case insensitive 2018-03-19 12:43:22 +01:00			`after_success:`
			`- Rscript -e 'covr::codecov()'`
			`notifications:`
			`email:`
			`recipients:`
			`- m.s.berends@umcg.nl`
			`- c.f.luz@umcg.nl`
			`on_success: change`
Update .travis.yml 2018-03-29 14:07:54 +02:00			`on_failure: change`