mirror of https://github.com/msberends/AMR.git
25 lines
725 B
Plaintext
25 lines
725 B
Plaintext
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% Generated by roxygen2: do not edit by hand
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% Please edit documentation in R/export_biosample.R
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\name{export_biosample}
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\alias{export_biosample}
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\title{Export Data Set as NCBI BioSample Antibiogram}
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\usage{
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export_biosample(
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x,
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filename = paste0("biosample_", format(Sys.time(), "\%Y-\%m-\%d-\%H\%M\%S"), ".xlsx"),
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type = "pathogen MIC",
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columns = where(is.mic),
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save_as_xlsx = TRUE
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)
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}
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\arguments{
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\item{x}{a data set}
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\item{filename}{a character string specifying the file name}
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\item{type}{a character string specifying the type of data set, either "pathogen MIC" or "beta-lactamase MIC", see \url{https://www.ncbi.nlm.nih.gov/biosample/docs/}}
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}
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\description{
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Export Data Set as NCBI BioSample Antibiogram
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}
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