mirror of
https://github.com/msberends/AMR.git
synced 2024-12-26 06:46:11 +01:00
44 lines
2.4 KiB
R
44 lines
2.4 KiB
R
|
# ==================================================================== #
|
||
|
|
# TITLE #
|
||
|
|
# AMR: An R Package for Working with Antimicrobial Resistance Data #
|
||
|
|
# #
|
||
|
|
# SOURCE #
|
||
|
|
# https://github.com/msberends/AMR #
|
||
|
|
# #
|
||
|
|
# CITE AS #
|
||
|
|
# Berends MS, Luz CF, Friedrich AW, Sinha BNM, Albers CJ, Glasner C #
|
||
|
|
# (2022). AMR: An R Package for Working with Antimicrobial Resistance #
|
||
|
|
# Data. Journal of Statistical Software, 104(3), 1-31. #
|
||
|
|
# doi:10.18637/jss.v104.i03 #
|
||
|
|
# #
|
||
|
|
# Developed at the University of Groningen, the Netherlands, in #
|
||
|
|
# collaboration with non-profit organisations Certe Medical #
|
||
|
|
# Diagnostics & Advice, and University Medical Center Groningen. #
|
||
|
|
# #
|
||
|
|
# This R package is free software; you can freely use and distribute #
|
||
|
|
# it for both personal and commercial purposes under the terms of the #
|
||
|
|
# GNU General Public License version 2.0 (GNU GPL-2), as published by #
|
||
|
|
# the Free Software Foundation. #
|
||
|
|
# We created this package for both routine data analysis and academic #
|
||
|
|
# research and it was publicly released in the hope that it will be #
|
||
|
|
# useful, but it comes WITHOUT ANY WARRANTY OR LIABILITY. #
|
||
|
|
# #
|
||
|
|
# Visit our website for the full manual and a complete tutorial about #
|
||
|
|
# how to conduct AMR data analysis: https://msberends.github.io/AMR/ #
|
||
|
|
# ==================================================================== #
|
||
|
|
|
||
|
|
expect_warning(as.ab("test"))
|
||
|
|
expect_identical(as.character(suppressWarnings(as.ab("test"))), NA_character_)
|
||
|
|
|
||
|
|
suppressMessages(
|
||
|
|
add_custom_antimicrobials(
|
||
|
|
data.frame(ab = "TEST",
|
||
|
|
name = "Test Antibiotic",
|
||
|
|
group = "Test Group")
|
||
|
|
)
|
||
|
|
)
|
||
|
|
|
||
|
|
expect_identical(as.character(as.ab("test")), "TEST")
|
||
|
|
expect_identical(ab_name("test"), "Test Antibiotic")
|
||
|
|
expect_identical(ab_group("test"), "Test Group")
|