fix for Salmonella group A, unit tests

R/aa_globals.R

@@ -94,7 +94,9 @@ TAXONOMY_VERSION <- list(
 )
 
 globalVariables(c(
+  ".mo",
   ".rowid",
+  ".syndromic_group",
   "ab",
   "ab_txt",
   "affect_ab_name",
@@ -105,8 +107,10 @@ globalVariables(c(
   "atc_group1",
   "atc_group2",
   "base_ab",
-  "ci_min",
+  "bind_rows",
   "ci_max",
+  "ci_min",
+  "clinical_breakpoints",
   "code",
   "cols",
   "count",
@@ -130,14 +134,15 @@ globalVariables(c(
   "language",
   "lookup",
   "method",
-  "mic",
   "mic ",
+  "mic",
   "microorganism",
   "microorganisms",
   "microorganisms.codes",
   "mo",
   "name",
   "new",
+  "numerator",
   "observations",
   "old",
   "old_name",
@@ -149,13 +154,14 @@ globalVariables(c(
   "reference.rule_group",
   "reference.version",
   "rowid",
-  "sir",
-  "clinical_breakpoints",
   "rule_group",
   "rule_name",
   "se_max",
   "se_min",
+  "SI",
+  "sir",
   "species",
+  "syndromic_group",
   "total",
   "txt",
   "type",