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add barplots

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dr. M.S. (Matthijs) Berends
2018-03-13 14:34:10 +01:00
parent e4b371d30a
commit 04fc3573ec
8 changed files with 86 additions and 35 deletions
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@ -13,22 +13,26 @@ AMR can also be predicted for the forthcoming years with the `rsi_predict` funct
It also contains functions to translate antibiotic codes from the lab (like `"AMOX"`) or the [WHO](https://www.whocc.no/atc_ddd_index/?code=J01CA04&showdescription=no) (like `"J01CA04"`) to trivial names (like `"amoxicillin"`) and vice versa.
## How to get it?
[![CRAN_Badge](http://www.r-pkg.org/badges/version/AMR)](http://cran.r-project.org/package=AMR)[![CRAN_Downloads](https://cranlogs.r-pkg.org/badges/grand-total/AMR)](http://cran.r-project.org/package=AMR)[![Travis_Build](https://travis-ci.org/msberends/AMR.svg?branch=master)](https://travis-ci.org/msberends/AMR)
This package is available on CRAN and also here on GitHub.
This package is available on CRAN (latest stable version) and also here on GitHub (latest development version).
### From CRAN (recommended, latest stable version)
[![CRAN_Badge](https://img.shields.io/cran/v/AMR.svg?label=CRAN&colorB=3679BC)](http://cran.r-project.org/package=AMR)
[![CRAN_Downloads](https://cranlogs.r-pkg.org/badges/grand-total/AMR)](http://cran.r-project.org/package=AMR)
### Latest stable version from CRAN (recommended)
For RStudio:
- Click on `Tools` and then `Install Packages...`
- Type in `AMR` and press <kbd>Install</kbd>
- RStudio:
- Click on `Tools` and then `Install Packages...`
- Type in `AMR` and press <kbd>Install</kbd>
- R console:
- `install.packages("AMR")`
### From GitHub (latest development version)
[![Travis_Build](https://travis-ci.org/msberends/AMR.svg?branch=master)](https://travis-ci.org/msberends/AMR)
[![Since_Release](https://img.shields.io/github/commits-since/msberends/AMR/latest.svg?colorB=3679BC)](https://github.com/msberends/AMR/releases)
[![Last_Commit](https://img.shields.io/github/last-commit/msberends/AMR.svg?colorB=3679BC)](https://github.com/msberends/AMR/commits/master)
Or in the R console:
```r
install.packages("AMR")
```
### Latest development version from GitHub
```r
install.packages("devtools")
devtools::install_github("msberends/AMR")
```
@ -155,6 +159,8 @@ bactlist # A tibble: 2,507 x 10
<sup>2</sup> Department of Medical, Market and Innovation (MMI), Certe Medische diagnostiek & advies, Groningen, the Netherlands
## Copyright
[![License](https://img.shields.io/github/license/msberends/AMR.svg?colorB=3679BC)](https://github.com/msberends/AMR/blob/master/LICENSE)
This R package is licensed under the [GNU General Public License (GPL) v2.0](https://github.com/msberends/AMR/blob/master/LICENSE). In a nutshell, this means that this package:
- May be used for commercial purposes