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(v1.6.0.9061) age() update

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dr. M.S. (Matthijs) Berends
2021-05-23 23:11:16 +02:00
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commit 07939b1a14
23 changed files with 71 additions and 48 deletions
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NEWS.md
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# `AMR` 1.6.0.9060
## <small>Last updated: 22 May 2021</small>
# `AMR` 1.6.0.9061
## <small>Last updated: 23 May 2021</small>
### Breaking change
* All antibiotic class selectors (such as `carbapenems()`, `aminoglycosides()`) can now be used for filtering as well, making all their accompanying `filter_*()` functions redundant (such as `filter_carbapenems()`, `filter_aminoglycosides()`). These functions are now deprecated and will be removed in a next release.
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* Updated join functions to always use `dplyr` join functions if the `dplyr` package is installed - now also preserving grouped variables
* Antibiotic class selectors (such as `cephalosporins()`) now maintain the column order from the original data
* Fix for selecting columns using `fluoroquinolones()`
* `age()` now vectorises over both `x` and `reference`
### Other
* All unit tests are now processed by the `tinytest` package, instead of the `testthat` package. The `testthat` package unfortunately requires tons of dependencies that are also heavy and only usable for recent R versions, disallowing developers to test a package under any R 3.* version. On the contrary, the `tinytest` package is very lightweight and dependency-free.