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update dependencies

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dr. M.S. (Matthijs) Berends
2018-04-02 16:05:09 +02:00
parent cee64ef050
commit 07bdd61241
15 changed files with 172 additions and 221 deletions
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4
tests/testthat/test-eucast.R
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@@ -12,8 +12,8 @@ test_that("EUCAST rules work", {
amox = "R", # Amoxicillin
stringsAsFactors = FALSE)
expect_equal(EUCAST_rules(a, info = FALSE), b)
expect_equal(interpretive_reading(a, info = FALSE), b)
expect_equal(suppressWarnings(interpretive_reading(a, info = TRUE)), b)
a <- data.frame(bactid = c("STAAUR", # Staphylococcus aureus
"STCGRA"), # Streptococcus pyognenes (Lancefield Group A)
coli = "-", # Colistin