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(v2.1.1.9163) cleanup
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@ -1,6 +1,6 @@
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Metadata-Version: 2.2
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Name: AMR
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Version: 2.1.1.9160
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Version: 2.1.1.9163
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Summary: A Python wrapper for the AMR R package
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Home-page: https://github.com/msberends/AMR
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Author: Matthijs Berends
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@ -28,8 +28,6 @@ from .functions import age_groups
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from .functions import antibiogram
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from .functions import wisca
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from .functions import retrieve_wisca_parameters
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from .functions import amr_class
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from .functions import amr_selector
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from .functions import aminoglycosides
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from .functions import aminopenicillins
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from .functions import antifungals
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@ -61,6 +59,8 @@ from .functions import streptogramins
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from .functions import tetracyclines
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from .functions import trimethoprims
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from .functions import ureidopenicillins
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from .functions import amr_class
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from .functions import amr_selector
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from .functions import administrable_per_os
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from .functions import administrable_iv
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from .functions import not_intrinsic_resistant
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@ -114,12 +114,6 @@ def wisca(x, *args, **kwargs):
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def retrieve_wisca_parameters(wisca_model, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.retrieve_wisca_parameters(wisca_model, *args, **kwargs))
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def amr_class(amr_class, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.amr_class(amr_class, *args, **kwargs))
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def amr_selector(filter, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.amr_selector(filter, *args, **kwargs))
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def aminoglycosides(only_sir_columns = False, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.aminoglycosides(only_sir_columns = False, *args, **kwargs))
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@ -213,6 +207,12 @@ def trimethoprims(only_sir_columns = False, *args, **kwargs):
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def ureidopenicillins(only_sir_columns = False, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.ureidopenicillins(only_sir_columns = False, *args, **kwargs))
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def amr_class(amr_class, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.amr_class(amr_class, *args, **kwargs))
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def amr_selector(filter, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.amr_selector(filter, *args, **kwargs))
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def administrable_per_os(only_sir_columns = False, *args, **kwargs):
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"""See our website of the R package for the manual: https://msberends.github.io/AMR/index.html"""
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return convert_to_python(amr_r.administrable_per_os(only_sir_columns = False, *args, **kwargs))
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@ -2,7 +2,7 @@ from setuptools import setup, find_packages
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setup(
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name='AMR',
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version='2.1.1.9160',
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version='2.1.1.9163',
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packages=find_packages(),
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install_requires=[
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'rpy2',
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