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(v1.3.0.9000) support across() in as.rsi()

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dr. M.S. (Matthijs) Berends
2020-08-10 11:44:58 +02:00
parent 791bb6d33f
commit 0d9602a6a9
31 changed files with 378 additions and 141 deletions
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NEWS.md
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# AMR 1.3.0
# AMR 1.3.0.9000
## <small>Last updated: 10 August 2020</small>
### Changed
* Support for using `dplyr`'s `across()` in `as.rsi()` to interpret MIC values or disk zone diameters, that now also automatically determines the column with microorganism names or codes.
```r
# until dplyr 1.0.0
your_data %>% mutate_if(is.mic, as.rsi)
your_data %>% mutate_if(is.disk, as.rsi)
# since dplyr 1.0.0
your_data %>% mutate(across(where(is.mic), as.rsi))
your_data %>% mutate(across(where(is.disk), as.rsi))
```
# AMR 1.3.0
### New
* Function `ab_from_text()` to retrieve antimicrobial drug names, doses and forms of administration from clinical texts in e.g. health care records, which also corrects for misspelling since it uses `as.ab()` internally