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(v1.5.0.9023) mo properties speed improvement

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dr. M.S. (Matthijs) Berends
2021-02-21 23:19:40 +01:00
parent 062c49fca1
commit 0fdabff1ba
18 changed files with 62 additions and 86 deletions
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3
vignettes/benchmarks.Rmd
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@ -1,6 +1,5 @@
---
title: "Benchmarks"
date: '`r format(Sys.Date(), "%d %B %Y")`'
output:
rmarkdown::html_vignette:
toc: true
@ -20,7 +19,7 @@ knitr::opts_chunk$set(
fig.width = 7.5,
fig.height = 4.5,
dpi = 75
)
)
```
One of the most important features of this package is the complete microbial taxonomic database, supplied by the [Catalogue of Life](http://catalogueoflife.org). We created a function `as.mo()` that transforms any user input value to a valid microbial ID by using intelligent rules combined with the taxonomic tree of Catalogue of Life.