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(v3.0.0.9034) fix MycoBank synonyms

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dr. M.S. (Matthijs) Berends
2025-09-18 13:58:34 +01:00
parent 5796e8f3a4
commit 10ba36821e
16 changed files with 8653 additions and 7641 deletions
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NEWS.md
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@@ -1,4 +1,4 @@
# AMR 3.0.0.9033
# AMR 3.0.0.9034
This is a bugfix release following the release of v3.0.0 in June 2025.
@@ -11,8 +11,9 @@ This is a bugfix release following the release of v3.0.0 in June 2025.
* Fixed a bug in `as.sir()` to allow any tidyselect language (#220)
* Fixed a bug in `as.sir()` to pick right breakpoint when `uti = FALSE` (#216)
* Fixed a bug in `ggplot_sir()` when using `combine_SI = FALSE` (#213)
* Fixed a bug the `antimicrobials` data set to remove statins (#229)
* Fixed a bug in `mdro()` to make sure all genes specified in arguments are acknowledged
* Fixed a bug the `antimicrobials` data set to remove statins (#229)
* Fixed a bug the `microorganisms` data set for MycoBank IDs and synonyms (#233)
* Fixed ATC J01CR05 to map to piperacillin/tazobactam rather than piperacillin/sulbactam (#230)
* Fixed skimmers (`skimr` package) of class `ab`, `sir`, and `disk` (#234)
* Fixed all plotting to contain a separate colour for SDD (susceptible dose-dependent) (#223)