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# Data Set with 500 ESBL Isolates
A data set containing 500 microbial isolates with MIC values of common
antibiotics and a binary `esbl` column for extended-spectrum
beta-lactamase (ESBL) production. This data set contains randomised
fictitious data but reflects reality and can be used to practise
AMR-related machine learning, e.g., classification modelling with
[tidymodels](https://amr-for-r.org/articles/AMR_with_tidymodels.html).
## Usage
``` r
esbl_isolates
```
## Format
A [tibble](https://tibble.tidyverse.org/reference/tibble.html) with 500
observations and 19 variables:
- `esbl`
Logical indicator if the isolate is ESBL-producing
- `genus`
Genus of the microorganism
- `AMC:COL`
MIC values for 17 antimicrobial agents, transformed to class
[`mic`](https://amr-for-r.org/reference/as.mic.md) (see
[`as.mic()`](https://amr-for-r.org/reference/as.mic.md))
## Details
See our [tidymodels
integration](https://amr-for-r.org/reference/amr-tidymodels.md) for an
example using this data set.
## Examples
``` r
esbl_isolates
#> # A tibble: 500 × 19
#> esbl genus AMC AMP TZP CXM FOX CTX CAZ GEN TOB TMP SXT
#> <lgl> <chr> <mic> <mic> <mic> <mic> <mic> <mic> <mic> <mic> <mic> <mic> <mic>
#> 1 FALSE Esch… 32 32 4 64 64 8.00 8.00 1 1 16.0 20
#> 2 FALSE Esch… 32 32 4 64 64 4.00 8.00 1 1 16.0 320
#> 3 FALSE Esch… 4 2 64 8 4 8.00 0.12 16 16 0.5 20
#> 4 FALSE Kleb… 32 32 16 64 64 8.00 8.00 1 1 0.5 20
#> 5 FALSE Esch… 32 32 4 4 4 0.25 2.00 1 1 16.0 320
#> 6 FALSE Citr… 32 32 16 64 64 64.00 32.00 1 1 0.5 20
#> 7 FALSE Morg… 32 32 4 64 64 16.00 2.00 1 1 0.5 20
#> 8 FALSE Prot… 16 32 4 1 4 8.00 0.12 1 1 16.0 320
#> 9 FALSE Ente… 32 32 8 64 64 32.00 4.00 1 1 0.5 20
#> 10 FALSE Citr… 32 32 32 64 64 8.00 64.00 1 1 16.0 320
#> # 490 more rows
#> # 6 more variables: NIT <mic>, FOS <mic>, CIP <mic>, IPM <mic>, MEM <mic>,
#> # COL <mic>
```