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(v2.1.1.9278) support AMR selectors in custom MDRO guideline

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dr. M.S. (Matthijs) Berends
2025-05-16 11:20:19 +02:00
parent b8d7c8af7f
commit 139f79d372
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NEWS.md
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# AMR 2.1.1.9277
# AMR 2.1.1.9278
*(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://amr-for-r.org/#get-this-package).)*
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* Improved algorithm of `first_isolate()` when using the phenotype-based method, to prioritise records with the highest availability of SIR values
* `scale_y_percent()` can now cope with ranges outside the 0-100% range
* MDRO determination (using `mdro()`)
* The Verbose Mode (`verbose = TRUE`) now includes the guideline name
* Implemented the new Dutch national MDRO guideline (SRI-richtlijn BRMO, Nov 2024)
* Added arguments `esbl`, `carbapenemase`, `mecA`, `mecC`, `vanA`, `vanB` to denote column names or logical values indicating presence of these genes (or production of their proteins)
* The Verbose Mode (`verbose = TRUE`) now includes the guideline name
* Added upport for antimicrobial selectors to use as as a custom rule (`custom_mdro_guideline()`)
* Added console colours support of `sir` class for Positron
### Other