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(v2.1.1.9278) support AMR selectors in custom MDRO guideline

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dr. M.S. (Matthijs) Berends
2025-05-16 11:20:19 +02:00
parent b8d7c8af7f
commit 139f79d372
15 changed files with 582 additions and 514 deletions
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man/custom_eucast_rules.Rd
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@@ -72,6 +72,11 @@ eucast_rules(df, rules = "custom", custom_rules = y, info = FALSE, overwrite = T
}\if{html}{\out{</div>}}
}
\subsection{Sharing rules among multiple users}{
The rules set (the \code{y} object in this case) could be exported to a shared file location using \code{\link[=saveRDS]{saveRDS()}} if you collaborate with multiple users. The custom rules set could then be imported using \code{\link[=readRDS]{readRDS()}}.
}
\subsection{Usage of multiple antimicrobials and antimicrobial group names}{
You can define antimicrobial groups instead of single antimicrobials for the rule consequence, which is the part \emph{after} the tilde (~). In the examples above, the antimicrobial group \code{aminopenicillins} includes both ampicillin and amoxicillin.