Built site for AMR@3.0.1.9003: ba30b08

reference/export_ncbi_biosample.md

@@ -0,0 +1,27 @@
+# Export Data Set as NCBI BioSample Antibiogram
+
+Export Data Set as NCBI BioSample Antibiogram
+
+## Usage
+
+``` r
+export_ncbi_biosample(x, filename = paste0("biosample_", format(Sys.time(),
+  "%Y-%m-%d-%H%M%S"), ".xlsx"), type = "pathogen MIC",
+  columns = where(is.mic), save_as_xlsx = TRUE)
+```
+
+## Arguments
+
+- x:
+
+  A data set.
+
+- filename:
+
+  A character string specifying the file name.
+
+- type:
+
+  A character string specifying the type of data set, either "pathogen
+  MIC" or "beta-lactamase MIC", see
+  <https://www.ncbi.nlm.nih.gov/biosample/docs/>.