AMR
(for R)
-July 2020
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NEWS.md
- Functions is_gram_negative()
and is_gram_positive()
as wrappers around mo_gramstain()
. They always return TRUE
or FALSE
(except when the input is NA
or the MO code is UNKNOWN
), thus always return FALSE
for species outside the taxonomic kingdom of Bacteria. If you have the dplyr
package installed, they can even determine the column with microorganisms themselves inside dplyr
functions:
example_isolates %>% - filter(is_gram_positive()) + filter(is_gram_positive()) #> NOTE: Using column `mo` as input for 'x'
Functions %not_like%
and %not_like_case%
as wrappers around %like%
and %like_case%
. The RStudio addin to insert the text " %like% " as provided in this package now iterates over all like variants. So if you have defined the keyboard shortcut Ctrl/Cmd + L to this addin, it will first insert %like%
and by pressing it again it will be replaced with %not_like%
, etc.