1
0
mirror of https://github.com/msberends/AMR.git synced 2024-12-26 05:26:13 +01:00

better example of grouping variable in ggplot_rsi

This commit is contained in:
dr. M.S. (Matthijs) Berends 2018-08-14 12:07:03 +02:00
parent b0995362af
commit 1699d7b8b3
2 changed files with 7 additions and 5 deletions

View File

@ -145,15 +145,17 @@ septic_patients %>%
![example_3_rsi](man/figures/rsi_example3.png)
It also supports grouping variables. Let's say we want to compare resistance of these antibiotics between hospitals A to D (variable `hospital_id`):
It also supports grouping variables. Let's say we want to compare resistance of drugs against Urine Tract Infections (UTI) between hospitals A to D (variable `hospital_id`):
```r
septic_patients %>%
select(hospital_id, amox, cipr) %>%
select(hospital_id, amox, nitr, fosf, trim, cipr) %>%
group_by(hospital_id) %>%
ggplot_rsi() + # start adding ggplot elements here with `+`
facet_grid("hospital_id") + # splitting the plots on our grouping variable
labs(title = "AMR of Amoxicillin And Ciprofloxacine Per Hospital")
ggplot_rsi(x = "hospital_id",
facet = "Antibiotic",
nrow = 1) +
labs(title = "AMR of Anti-UTI Drugs Per Hospital",
x = "Hospital")
```
![example_4_rsi](man/figures/rsi_example4.png)

Binary file not shown.

Before

Width:  |  Height:  |  Size: 21 KiB

After

Width:  |  Height:  |  Size: 22 KiB