(v1.7.1.9000) ab_class update, unit tests

2025-07-13 05:21:50 +02:00 · 2021-06-04 21:07:55 +02:00
parent 7e70403efb
commit 1908e7cc7a
34 changed files with 365 additions and 1368 deletions
--- a/inst/tinytest/test-bug_drug_combinations.R
+++ b/inst/tinytest/test-bug_drug_combinations.R
@ -28,3 +28,9 @@ expect_inherits(b, "bug_drug_combinations")
 expect_stdout(suppressMessages(print(b)))
 expect_true(is.data.frame(format(b)))
 expect_true(is.data.frame(format(b, combine_IR = TRUE, add_ab_group = FALSE)))
+if (AMR:::pkg_is_available("dplyr")) {
+  expect_true(example_isolates %>% 
+                group_by(hospital_id) %>% 
+                bug_drug_combinations(FUN = mo_gramstain) %>% 
+                is.data.frame())
+}