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revert back to pre-antibiogram

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dr. M.S. (Matthijs) Berends
2023-02-09 13:07:39 +01:00
parent aa48c6bf53
commit 1a0dc4bf46
53 changed files with 984 additions and 1996 deletions
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2
inst/tinytest/test-first_isolate.R
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@ -228,7 +228,7 @@ expect_identical(
# notice that all mo's are distinct, so all are TRUE
expect_true(all(first_isolate(AMR:::distinct(example_isolates, mo, .keep_all = TRUE), info = TRUE) == TRUE))
expect_true(all(first_isolate(AMR:::pm_distinct(example_isolates, mo, .keep_all = TRUE), info = TRUE) == TRUE))
# only one isolate, so return fast
expect_true(first_isolate(data.frame(mo = "Escherichia coli", date = Sys.Date(), patient = "patient"), info = TRUE))