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revert back to pre-antibiogram

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dr. M.S. (Matthijs) Berends
2023-02-09 13:07:39 +01:00
parent aa48c6bf53
commit 1a0dc4bf46
53 changed files with 984 additions and 1996 deletions
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4
man/example_isolates_unclean.Rd
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@ -5,7 +5,7 @@
\alias{example_isolates_unclean}
\title{Data Set with Unclean Data}
\format{
A \link[tibble:tibble]{tibble} with 3 000 observations and 8 variables:
A \link[tibble:tibble]{tibble} with 3,000 observations and 8 variables:
\itemize{
\item \code{patient_id}\cr ID of the patient
\item \code{date}\cr date of receipt at the laboratory
@ -18,7 +18,7 @@ A \link[tibble:tibble]{tibble} with 3 000 observations and 8 variables:
example_isolates_unclean
}
\description{
A data set containing 3 000 microbial isolates that are not cleaned up and consequently not ready for AMR data analysis. This data set can be used for practice.
A data set containing 3,000 microbial isolates that are not cleaned up and consequently not ready for AMR data analysis. This data set can be used for practice.
}
\details{
Like all data sets in this package, this data set is publicly available for download in the following formats: R, MS Excel, Apache Feather, Apache Parquet, SPSS, SAS, and Stata. Please visit \href{https://msberends.github.io/AMR/articles/datasets.html}{our website for the download links}. The actual files are of course available on \href{https://github.com/msberends/AMR/tree/main/data-raw}{our GitHub repository}.