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(v1.7.1.9025) unit tests

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dr. M.S. (Matthijs) Berends
2021-08-18 23:19:38 +02:00
parent a44283f998
commit 1b62bab007
17 changed files with 191 additions and 302 deletions
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18
R/deprecated.R
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@ -26,23 +26,9 @@
#' Deprecated Functions
#'
#' These functions are so-called '[Deprecated]'. **They will be removed in a future release.** Using the functions will give a warning with the name of the function it has been replaced by (if there is one).
#' @details All antibiotic class selectors (such as [carbapenems()], [aminoglycosides()]) can now be used for filtering as well, making all their accompanying `filter_*()` functions redundant (such as [filter_carbapenems()], [filter_aminoglycosides()]).
#' @inheritSection lifecycle Retired Lifecycle
#' @inheritSection AMR Read more on Our Website!
#' @keywords internal
#' @name AMR-deprecated
#' @export
p_symbol <- function(p, emptychar = " ") {
.Deprecated(package = "AMR", new = "cleaner::p_symbol")
p <- as.double(p)
s <- rep(NA_character_, length(p))
s[p <= 1] <- emptychar
s[p <= 0.100] <- "."
s[p <= 0.050] <- "*"
s[p <= 0.010] <- "**"
s[p <= 0.001] <- "***"
s
}
# @export
NULL