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new ggplot enhancement

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dr. M.S. (Matthijs) Berends
2018-08-11 21:30:00 +02:00
parent 4680df1e9c
commit 1ba7d883fe
20 changed files with 312 additions and 151 deletions
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9
man/first_isolate.Rd
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@@ -9,10 +9,11 @@ Methodology of this function is based on: \strong{M39 Analysis and Presentation
\usage{
first_isolate(tbl, col_date, col_patient_id, col_bactid = NA,
col_testcode = NA, col_specimen = NA, col_icu = NA,
col_keyantibiotics = NA, episode_days = 365, testcodes_exclude = "",
icu_exclude = FALSE, filter_specimen = NA, output_logical = TRUE,
type = "keyantibiotics", ignore_I = TRUE, points_threshold = 2,
info = TRUE, col_genus = NA, col_species = NA)
col_keyantibiotics = NA, episode_days = 365,
testcodes_exclude = "", icu_exclude = FALSE, filter_specimen = NA,
output_logical = TRUE, type = "keyantibiotics", ignore_I = TRUE,
points_threshold = 2, info = TRUE, col_genus = NA,
col_species = NA)
}
\arguments{
\item{tbl}{a \code{data.frame} containing isolates.}