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eucast_rules(): add add_if_missing argument to control NA imputation (#259)

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When `add_if_missing = FALSE`, rules are only applied to cells that already
contain an SIR value; `NA` cells are left untouched. This is useful with
`overwrite = TRUE` to update reported results without imputing values for
drugs that were not tested.

https://claude.ai/code/session_01Nucc8nXGLqNUjtuC9GrhTc
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Claude
2026-03-09 20:00:06 +00:00
parent 353eaa3f38
commit 1d48012355
3 changed files with 24 additions and 17 deletions
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DESCRIPTION
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Package: AMR
Version: 3.0.1.9033
Version: 3.0.1.9034
Date: 2026-03-09
Title: Antimicrobial Resistance Data Analysis
Description: Functions to simplify and standardise antimicrobial resistance (AMR)