1
0
mirror of https://github.com/msberends/AMR.git synced 2025-07-13 02:32:07 +02:00

(v2.1.1.9233) chore: make all argument texts full sentences

This commit is contained in:
2025-03-31 14:53:24 +02:00
parent 63099cd81e
commit 1fdab84103
91 changed files with 720 additions and 701 deletions

View File

@ -30,8 +30,8 @@
#' Calculate the Matching Score for Microorganisms
#'
#' This algorithm is used by [as.mo()] and all the [`mo_*`][mo_property()] functions to determine the most probable match of taxonomic records based on user input.
#' @param x Any user input value(s)
#' @param n A full taxonomic name, that exists in [`microorganisms$fullname`][microorganisms]
#' @param x Any user input value(s).
#' @param n A full taxonomic name, that exists in [`microorganisms$fullname`][microorganisms].
#' @note This algorithm was originally developed in 2018 and subsequently described in: Berends MS *et al.* (2022). **AMR: An R Package for Working with Antimicrobial Resistance Data**. *Journal of Statistical Software*, 104(3), 1-31; \doi{10.18637/jss.v104.i03}.
#'
#' Later, the work of Bartlett A *et al.* about bacterial pathogens infecting humans (2022, \doi{10.1099/mic.0.001269}) was incorporated, and optimalisations to the algorithm were made.