P281424/AMR
1
0
Fork 0
mirror of https://github.com/msberends/AMR.git synced 2025-12-15 09:50:21 +01:00
Code Releases Activity

(v1.5.0.9013) updated tibble printing colours

Browse Source
This commit is contained in:
dr. M.S. (Matthijs) Berends
2021-01-28 16:09:30 +01:00
parent 331c1f6508
commit 20d638c193
39 changed files with 162 additions and 108 deletions
Download Patch File Download Diff File Expand all files Collapse all files

2
man/pca.Rd
View File

@@ -80,7 +80,7 @@ if (require("dplyr")) {
# calculate the resistance per group first
resistance_data <- example_isolates \%>\%
group_by(order = mo_order(mo), # group on anything, like order
genus = mo_genus(mo)) \%>\% # and genus as we do here
genus = mo_genus(mo)) \%>\% # and genus as we do here;
summarise_if(is.rsi, resistance) # then get resistance of all drugs
# now conduct PCA for certain antimicrobial agents