mirror of
https://github.com/msberends/AMR.git
synced 2025-07-10 05:41:59 +02:00
Built site for AMR: 1.8.2.9101@7b00b4f
This commit is contained in:
github-actions
@ -10,7 +10,7 @@
|
||||
|
||||
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
|
||||
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9100</small>
|
||||
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9101</small>
|
||||
|
||||
|
||||
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
|
||||
@ -188,42 +188,42 @@
|
||||
<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
|
||||
<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 64 1 4 0.025 0.01 0.5 0.25 2 >=256 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 1 8 8 64 0.0625 0.005 0.125 2 0.001 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.005 0.005 32 128 8 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.005 8 1 0.005 0.025 0.5 2 0.25 1 0.005 256 0.01 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [13] 128 1 64 256 2 0.01 0.002 0.025 16 128 0.005 1 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 256 </span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 10 21 50 40 30 50 48 27 34 18 41 40 11 43 28 31 8 27 48 43 23 22 42 39 23</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 47 46 41 50 25 23 41 13 13 22 41 39 22 31 34 43 20 42 8 13 45 44 34 10 40</span>
|
||||
<span class="r-in"><span><span class="fu">random_sir</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'sir'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] R S S R S I I R S I R S I I I S R I S S S S I S I</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] I R R S R I S S I R R S S I S R S I S S R R S S R</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="co"># \donttest{</span></span></span>
|
||||
<span class="r-in"><span><span class="co"># make the random generation more realistic by setting a bug and/or drug:</span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 0.0625-64</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.025 0.001 16 32 16 0.0625 0.0625 8 256 128 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 0.01 0.5 128 0.005 8 16 32 0.0625 0.002 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.01 2 0.025 2 256 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.0625 0.025 0.002 4 64 1 32 0.0625 8 0.25 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [11] 16 16 2 0.01 0.25 0.002 0.0625 0.0625 16 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [21] 0.125 0.025 0.002 256 0.5 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-16</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] <=1 4 <=1 16 2 <=1 4 2 4 2 4 32 4 2 4 2 16 2 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [20] <=1 <=1 32 2 <=1 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 2 8 2 1 1 8 0.5 2 4 1 4 0.5 8 1 16 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [16] 0.5 16 16 8 2 8 0.25 4 0.5 1 </span>
|
||||
<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-4</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 4 0.125 8 1 4 0.125 0.125 0.5 2 0.5 8 2 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [13] 1 0.25 0.125 0.125 1 2 0.5 8 8 4 1 0.125</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [25] 0.125</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 0.0625 4 8 2 4 0.5 0.0625 8 0.5 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [10] 0.5 0.25 8 0.0625 8 0.125 0.125 2 4 </span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [19] 0.25 2 0.25 8 0.25 2 <=0.025</span>
|
||||
<span class="r-in"><span></span></span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 8-50</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 40 36 14 10 48 38 42 9 50 22 15 43 22 32 19 41 10 30 22 48 45 50 35 38 43</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 21 40 47 36 48 49 42 26 12 46 42 47 39 44 17 30 14 50 9 35 49 22 24 40 31</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 11-17</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 11 11 12 11 17 17 15 12 16 12 11 11 15 14 13 13 11 15 12 11 13 14 17 14 17</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 12 15 11 13 11 11 11 17 13 14 16 11 12 11 13 13 17 16 11 13 13 14 11 14 14</span>
|
||||
<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 12-27</span></span></span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 20 16 25 17 20 20 23 17 27 25 16 20 24 16 21 22 24 21 26 23 21 25 15 24 21</span>
|
||||
<span class="r-out co"><span class="r-pr">#></span> [1] 26 20 25 16 25 27 18 17 16 15 20 18 19 16 20 26 27 16 19 24 16 21 18 20 19</span>
|
||||
<span class="r-in"><span><span class="co"># }</span></span></span>
|
||||
</code></pre></div>
|
||||
</div>
|
||||
|
||||
Reference in New Issue
Block a user