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(v3.0.1.9043) fix unit test

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dr. M.S. (Matthijs) Berends
2026-04-02 12:24:12 +02:00
parent 26613d774b
commit 225493192c
3 changed files with 5 additions and 5 deletions
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6
tests/testthat/test-eucast_rules.R
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@@ -32,15 +32,15 @@ test_that("test-eucast_rules.R", {
# thoroughly check input table
expect_equal(
colnames(AMR:::EUCAST_RULES_DF),
c(
sort(colnames(AMR:::EUCAST_RULES_DF)),
sort(c(
"if_mo_property", "like.is.one_of", "this_value",
"and_these_antibiotics", "have_these_values",
"then_change_these_antibiotics", "to_value",
"reference.rule", "reference.rule_group",
"reference.version",
"note"
)
))
)
MOs_mentioned <- unique(AMR:::EUCAST_RULES_DF$this_value)
MOs_mentioned <- sort(trimws(unlist(strsplit(MOs_mentioned[!AMR:::is_valid_regex(MOs_mentioned)], ",", fixed = TRUE))))