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(v2.1.1.9136) console colours, updated Suggests, added as.ab() improvement

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dr. M.S. (Matthijs) Berends
2025-01-31 16:01:52 +01:00
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commit 22afd918e6
13 changed files with 114 additions and 101 deletions
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NEWS.md
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# AMR 2.1.1.9135
# AMR 2.1.1.9136
*(this beta version will eventually become v3.0. We're happy to reach a new major milestone soon, which will be all about the new One Health support! Install this beta using [the instructions here](https://msberends.github.io/AMR/#latest-development-version).)*
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* MDRO determination (using `mdro()`)
* Implemented the new Dutch national MDRO guideline (SRI-richtlijn BRMO, Nov 2024)
* Added arguments `esbl`, `carbapenemase`, `mecA`, `mecC`, `vanA`, `vanB` to denote column names or logical values indicating presence of these genes (or production of their proteins)
* Added console colours support of `sir` class for Positron
## Other
* Added Dr. Larisse Bolton as contributor for her fantastic implementation of WISCA in a mathematically solid way