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(v0.7.0.9008) T. vaginalis, rsi_df

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dr. M.S. (Matthijs) Berends
2019-06-13 14:28:46 +02:00
parent 699e87ab4a
commit 254745061c
32 changed files with 382 additions and 259 deletions
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6
tests/testthat/test-count.R
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@ -50,17 +50,17 @@ test_that("counts work", {
# count_df
expect_equal(
septic_patients %>% select(AMX) %>% count_df() %>% pull(Value),
septic_patients %>% select(AMX) %>% count_df() %>% pull(value),
c(septic_patients$AMX %>% count_SI(),
septic_patients$AMX %>% count_R())
)
expect_equal(
septic_patients %>% select(AMX) %>% count_df(combine_IR = TRUE) %>% pull(Value),
septic_patients %>% select(AMX) %>% count_df(combine_IR = TRUE) %>% pull(value),
c(septic_patients$AMX %>% count_S(),
septic_patients$AMX %>% count_IR())
)
expect_equal(
septic_patients %>% select(AMX) %>% count_df(combine_SI = FALSE) %>% pull(Value),
septic_patients %>% select(AMX) %>% count_df(combine_SI = FALSE) %>% pull(value),
c(septic_patients$AMX %>% count_S(),
septic_patients$AMX %>% count_I(),
septic_patients$AMX %>% count_R())

6
tests/testthat/test-portion.R
View File

@ -100,17 +100,17 @@ test_that("portions works", {
# portion_df
expect_equal(
septic_patients %>% select(AMX) %>% portion_df() %>% pull(Value),
septic_patients %>% select(AMX) %>% portion_df() %>% pull(value),
c(septic_patients$AMX %>% portion_SI(),
septic_patients$AMX %>% portion_R())
)
expect_equal(
septic_patients %>% select(AMX) %>% portion_df(combine_IR = TRUE) %>% pull(Value),
septic_patients %>% select(AMX) %>% portion_df(combine_IR = TRUE) %>% pull(value),
c(septic_patients$AMX %>% portion_S(),
septic_patients$AMX %>% portion_IR())
)
expect_equal(
septic_patients %>% select(AMX) %>% portion_df(combine_SI = FALSE) %>% pull(Value),
septic_patients %>% select(AMX) %>% portion_df(combine_SI = FALSE) %>% pull(value),
c(septic_patients$AMX %>% portion_S(),
septic_patients$AMX %>% portion_I(),
septic_patients$AMX %>% portion_R())