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support for old rsi arguments

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dr. M.S. (Matthijs) Berends
2023-03-11 14:24:34 +01:00
parent 4416394e10
commit 262598b8d7
21 changed files with 327 additions and 199 deletions
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R/sir.R
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@@ -775,7 +775,7 @@ as_sir_method <- function(method_short,
} else {
mo.bak <- mo
}
# be sure to take current taxonomy, as the clinical_breakpoints data set only contains current taxonomy
# be sure to take current taxonomy, as the 'clinical_breakpoints' data set only contains current taxonomy
mo <- suppressWarnings(suppressMessages(as.mo(mo, keep_synonyms = FALSE, inf0 = FALSE)))
guideline_coerced <- get_guideline(guideline, reference_data)
if (is.na(ab)) {