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(v0.8.0.9033) antivirals data set, cleanup

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dr. M.S. (Matthijs) Berends
2019-11-18 12:10:47 +01:00
parent 67f3f4387b
commit 267320f15f
97 changed files with 1131 additions and 644 deletions
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2
man/eucast_rules.Rd
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@@ -158,6 +158,7 @@ On our website \url{https://msberends.gitlab.io/AMR} you can find \href{https://
}
\examples{
\donttest{
a <- data.frame(mo = c("Staphylococcus aureus",
"Enterococcus faecalis",
"Escherichia coli",
@@ -193,7 +194,6 @@ b
# 5 Pseudomonas aeruginosa R R - - R R R
\donttest{
# do not apply EUCAST rules, but rather get a data.frame
# with 18 rows, containing all details about the transformations:
c <- eucast_rules(a, verbose = TRUE)