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Built site for AMR: 1.8.2.9064@23fe427

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2022-12-17 13:39:03 +00:00
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commit 29c310e535
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reference/mo_matching_score.html
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@@ -10,7 +10,7 @@
<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9063</small>
<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9064</small>
<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
@@ -198,9 +198,20 @@
<span class="r-out co"><span class="r-pr">#&gt;</span> --------------------------------------------------------------------------------</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> "K. pneumoniae" -&gt; Klebsiella pneumoniae (B_KLBSL_PNMN, 0.786)</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Based on input "K pneumoniae"</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Also matched: Klebsiella pneumoniae ozaenae (0.707), Klebsiella pneumoniae</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> pneumoniae (0.688), Klebsiella pneumoniae rhinoscleromatis (0.658) and</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Kroppenstedtia pulmonis (0.304)</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Also matched: Klebsiella pneumoniae ozaenae (0.707), Klebsiella</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> pneumoniae pneumoniae (0.688), Klebsiella pneumoniae rhinoscleromatis</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> (0.658), Kosakonia pseudosacchari (0.542), Kalamiella piersonii</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> (0.525), Kangiella profundi (0.500), Klebsiella pasteurii (0.500),</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Klebsiella planticola (0.500), Kushneria pakistanensis (0.500),</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Kushneria phosphatilytica (0.500), Kushneria phyllosphaerae (0.500),</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Kroppenstedtia pulmonis (0.304), Kibdelosporangium phytohabitans</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> (0.282), Kitasatospora putterlickiae (0.269), Kibdelosporangium</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> philippinense (0.266), Kitasatospora psammotica (0.260), Kangsaoukella</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> pontilimi (0.250), Keratinibaculum paraultunense (0.250),</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Kibdelosporangium persicum (0.250), Kingella potus (0.250), Kitasatoa</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> purpurea (0.250), Kitasatospora paracochleata (0.250), Kitasatospora</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> paracochleatus (0.250), Kitasatospora paranensis (0.250) and</span>
<span class="r-out co"><span class="r-pr">#&gt;</span> Kitasatospora phosalacinea (0.250) [showing first 25]</span>
<span class="r-in"><span></span></span>
<span class="r-in"><span><span class="fu">mo_matching_score</span><span class="op">(</span></span></span>
<span class="r-in"><span> x <span class="op">=</span> <span class="st">"E. coli"</span>,</span></span>