(v0.7.1.9018) deps

man/eucast_rules.Rd

@@ -135,8 +135,6 @@ On our website \url{https://msberends.gitlab.io/AMR} you can find \href{https://
 }
 
 \examples{
-a <- eucast_rules(septic_patients)
-
 a <- data.frame(mo = c("Staphylococcus aureus",
                        "Enterococcus faecalis",
                        "Escherichia coli",
@@ -172,7 +170,7 @@ b
 # 5 Pseudomonas aeruginosa    R    R    -    -    R    R    R
 
 
-# do not apply EUCAST rules, but rather get a a data.frame
+# do not apply EUCAST rules, but rather get a data.frame
 # with 18 rows, containing all details about the transformations:
 c <- eucast_rules(a, verbose = TRUE)
 }

man/like.Rd

@@ -56,6 +56,7 @@ a \%like\% b
 
 # get frequencies of bacteria whose name start with 'Ent' or 'ent'
 library(dplyr)
+library(clean)
 septic_patients \%>\%
   left_join_microorganisms() \%>\%
   filter(genus \%like\% '^ent') \%>\%