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<a class="navbar-brand me-2" href="../index.html">AMR (for R)</a>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9071</small>
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<small class="nav-text text-muted me-auto" data-bs-toggle="tooltip" data-bs-placement="bottom" title="">1.8.2.9072</small>
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<button class="navbar-toggler" type="button" data-bs-toggle="collapse" data-bs-target="#navbar" aria-controls="navbar" aria-expanded="false" aria-label="Toggle navigation">
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@ -183,42 +183,43 @@
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<h2 id="ref-examples">Examples<a class="anchor" aria-label="anchor" href="#ref-examples"></a></h2>
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<div class="sourceCode"><pre class="sourceCode r"><code><span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 128 8 0.5 64 4 0.01 4 0.01 32 </span>
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<span class="r-out co"><span class="r-pr">#></span> [10] 2 0.01 >=256 1 0.002 16 <=0.001 128 0.005 </span>
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<span class="r-out co"><span class="r-pr">#></span> [19] 0.125 0.25 0.025 >=256 <=0.001 8 4 </span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 0.025 <=0.001 1 16 2 0.025 0.005 0.25 <=0.001</span>
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<span class="r-out co"><span class="r-pr">#></span> [10] 0.002 8 0.002 <=0.001 0.025 256 <=0.001 8 0.25 </span>
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<span class="r-out co"><span class="r-pr">#></span> [19] 16 4 1 1 0.25 0.005 0.0625 </span>
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<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 16 18 44 14 47 45 38 19 47 40 37 30 49 37 49 22 21 44 44 12 14 9 40 49 32</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 31 45 50 48 45 18 18 19 9 37 23 45 35 18 34 47 36 31 12 21 7 42 30 9 40</span>
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<span class="r-in"><span><span class="fu">random_rsi</span><span class="op">(</span><span class="fl">25</span><span class="op">)</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> Class 'rsi'</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] I I R I S I I R R S I I S I I I R I S R S R S R I</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] I I I I I R R S S I R R I I R R R I S S R I I S S</span>
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<span class="r-in"><span></span></span>
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<span class="r-in"><span><span class="co"># \donttest{</span></span></span>
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<span class="r-in"><span><span class="co"># make the random generation more realistic by setting a bug and/or drug:</span></span></span>
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<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 0.0625-64</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 0.001 1 0.025 0.5 0.025 4 0.005 8 0.025 0.025 0.01 16 </span>
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<span class="r-out co"><span class="r-pr">#></span> [13] 0.001 32 2 0.005 0.001 0.002 32 0.125 16 0.25 128 1 </span>
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<span class="r-out co"><span class="r-pr">#></span> [25] 0.025</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 0.01 0.25 <=0.002 8 0.0625 0.125 128 4 4 </span>
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<span class="r-out co"><span class="r-pr">#></span> [10] 2 4 0.005 16 <=0.002 1 0.005 0.25 0.5 </span>
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<span class="r-out co"><span class="r-pr">#></span> [19] 0.01 0.025 2 0.125 64 <=0.002 <=0.002</span>
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<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-16</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 4 2 16 4 2 4 4 4 2 16 8 16 4 4 4 8 1 8 2 8 4 4 1 8 4 </span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 2 8 1 16 2 8 16 <=0.5 2 1 2 1 </span>
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<span class="r-out co"><span class="r-pr">#></span> [13] <=0.5 1 8 <=0.5 1 16 4 16 <=0.5 4 16 1 </span>
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<span class="r-out co"><span class="r-pr">#></span> [25] 8 </span>
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<span class="r-in"><span><span class="fu">random_mic</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"meropenem"</span><span class="op">)</span> <span class="co"># range 0.0625-4</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> Class 'mic'</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 0.125 1 0.125 2 <=0.0625 1 0.25 2 </span>
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<span class="r-out co"><span class="r-pr">#></span> [9] 2 0.5 1 8 4 4 4 2 </span>
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<span class="r-out co"><span class="r-pr">#></span> [17] 1 2 2 0.125 1 1 8 0.25 </span>
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<span class="r-out co"><span class="r-pr">#></span> [25] 8 </span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 0.0625 2 4 0.5 0.125 0.0625 <=0.025 2 0.25 </span>
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<span class="r-out co"><span class="r-pr">#></span> [10] <=0.025 2 0.5 1 4 0.25 <=0.025 0.25 <=0.025</span>
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<span class="r-out co"><span class="r-pr">#></span> [19] 2 0.125 0.0625 <=0.025 2 1 0.25 </span>
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<span class="r-in"><span></span></span>
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<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span><span class="op">)</span> <span class="co"># range 8-50</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 50 49 18 47 37 43 10 44 46 8 45 47 27 21 44 20 49 47 46 42 26 14 30 42 24</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 22 12 42 49 11 15 16 24 16 42 48 15 48 13 45 47 45 39 48 36 11 40 50 42 36</span>
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<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Klebsiella pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 11-17</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 14 11 17 11 13 13 13 11 14 13 17 11 14 15 13 15 17 17 17 12 17 13 12 17 16</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 17 13 11 16 14 15 11 13 14 12 13 11 12 14 13 11 16 15 12 15 15 13 12 14 16</span>
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<span class="r-in"><span><span class="fu">random_disk</span><span class="op">(</span><span class="fl">25</span>, <span class="st">"Streptococcus pneumoniae"</span>, <span class="st">"ampicillin"</span><span class="op">)</span> <span class="co"># range 12-27</span></span></span>
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<span class="r-out co"><span class="r-pr">#></span> Class 'disk'</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 18 15 18 20 16 18 27 20 21 26 22 17 17 17 27 23 15 19 20 23 27 27 21 15 26</span>
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<span class="r-out co"><span class="r-pr">#></span> [1] 19 16 27 26 25 23 23 20 19 15 22 23 21 22 15 17 24 21 19 21 27 25 16 15 20</span>
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<span class="r-in"><span><span class="co"># }</span></span></span>
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</code></pre></div>
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</div>
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