From 2d20ac1a7d551ba21bd3f3131c36a0e1e34bd8f2 Mon Sep 17 00:00:00 2001 From: github-actions <41898282+github-actions[bot]@users.noreply.github.com> Date: Sat, 20 Sep 2025 16:24:20 +0000 Subject: [PATCH] Built site for AMR@3.0.1: adee419 --- 404.html | 2 +- LICENSE-text.html | 2 +- articles/AMR.html | 10 ++-- articles/AMR_for_Python.html | 2 +- articles/AMR_with_tidymodels.html | 2 +- articles/EUCAST.html | 2 +- articles/PCA.html | 2 +- articles/WHONET.html | 2 +- articles/WISCA.html | 2 +- articles/datasets.html | 4 +- articles/index.html | 2 +- authors.html | 2 +- index.html | 2 +- news/index.html | 13 +++-- pkgdown.yml | 2 +- reference/AMR-deprecated.html | 2 +- reference/AMR-options.html | 2 +- reference/AMR.html | 2 +- reference/WHOCC.html | 2 +- reference/WHONET.html | 2 +- reference/ab_from_text.html | 2 +- reference/ab_property.html | 2 +- reference/add_custom_antimicrobials.html | 2 +- reference/add_custom_microorganisms.html | 2 +- reference/age.html | 22 +++---- reference/age_groups.html | 2 +- reference/antibiogram.html | 2 +- reference/antimicrobial_selectors.html | 2 +- reference/antimicrobials.html | 2 +- reference/as.ab.html | 2 +- reference/as.av.html | 2 +- reference/as.disk.html | 2 +- reference/as.mic.html | 2 +- reference/as.mo.html | 2 +- reference/as.sir.html | 10 ++-- reference/atc_online.html | 2 +- reference/av_from_text.html | 2 +- reference/av_property.html | 2 +- reference/availability.html | 2 +- reference/bug_drug_combinations.html | 2 +- reference/clinical_breakpoints.html | 2 +- reference/count.html | 2 +- reference/custom_eucast_rules.html | 2 +- reference/custom_mdro_guideline.html | 2 +- reference/dosage.html | 2 +- reference/eucast_rules.html | 2 +- reference/example_isolates.html | 2 +- reference/example_isolates_unclean.html | 2 +- reference/export_ncbi_biosample.html | 2 +- reference/first_isolate.html | 2 +- reference/g.test.html | 2 +- reference/get_episode.html | 2 +- reference/ggplot_pca.html | 2 +- reference/ggplot_sir.html | 2 +- reference/guess_ab_col.html | 2 +- reference/index.html | 2 +- reference/intrinsic_resistant.html | 2 +- reference/italicise_taxonomy.html | 2 +- reference/join.html | 2 +- reference/key_antimicrobials.html | 2 +- reference/kurtosis.html | 2 +- reference/like.html | 2 +- reference/mdro.html | 2 +- reference/mean_amr_distance.html | 2 +- reference/microorganisms.codes.html | 2 +- reference/microorganisms.groups.html | 2 +- reference/microorganisms.html | 2 +- reference/mo_matching_score.html | 2 +- reference/mo_property.html | 2 +- reference/mo_source.html | 2 +- reference/pca.html | 2 +- reference/plot-10.png | Bin 87342 -> 70715 bytes reference/plot-11.png | Bin 70715 -> 19312 bytes reference/plot-12.png | Bin 19312 -> 86421 bytes reference/plot-13.png | Bin 73842 -> 85572 bytes reference/plot-14.png | Bin 86113 -> 38976 bytes reference/plot-15.png | Bin 83999 -> 55162 bytes reference/plot-16.png | Bin 38976 -> 37343 bytes reference/plot-17.png | Bin 55162 -> 53379 bytes reference/plot-18.png | Bin 37343 -> 51169 bytes reference/plot-19.png | Bin 53379 -> 43411 bytes reference/plot-20.png | Bin 51169 -> 0 bytes reference/plot-21.png | Bin 43411 -> 0 bytes reference/plot-5.png | Bin 25019 -> 29773 bytes reference/plot-6.png | Bin 27974 -> 29773 bytes reference/plot-7.png | Bin 30826 -> 26190 bytes reference/plot-8.png | Bin 26190 -> 33705 bytes reference/plot-9.png | Bin 33705 -> 92180 bytes reference/plot.html | 70 ++++++++++------------- reference/proportion.html | 2 +- reference/random-1.png | Bin 32898 -> 32918 bytes reference/random-2.png | Bin 48295 -> 48276 bytes reference/random.html | 19 +++--- reference/resistance_predict.html | 2 +- reference/skewness.html | 2 +- reference/top_n_microorganisms.html | 2 +- reference/translate.html | 2 +- search.json | 2 +- 98 files changed, 145 insertions(+), 147 deletions(-) delete mode 100644 reference/plot-20.png delete mode 100644 reference/plot-21.png diff --git a/404.html b/404.html index f1cc285d4..81f69e965 100644 --- a/404.html +++ b/404.html @@ -31,7 +31,7 @@ AMR (for R) - 3.0.0.9036 + 3.0.1