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eucast rules fix, 1st isolate fix, website update

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dr. M.S. (Matthijs) Berends
2018-12-31 01:48:53 +01:00
parent 469b145d8c
commit 2e4d703338
51 changed files with 1473 additions and 1760 deletions
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docs/reference/microorganisms.certe.html
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<div class="ref-description">
<p>A data set containing all bacteria codes of Certe MMB. These codes can be joined to data with an ID from <code>microorganisms$mo</code> (using <code>left_join_microorganisms</code>). GLIMS codes can also be translated to valid <code>MO</code>s with <code>guess_mo</code>.</p>
<p>A data set containing all bacteria codes of Certe MMB. These codes can be joined to data with an ID from <code><a href='microorganisms.html'>microorganisms</a>$mo</code> (using <code><a href='join.html'>left_join_microorganisms</a></code>). GLIMS codes can also be translated to valid <code>MO</code>s with <code><a href='as.mo.html'>guess_mo</a></code>.</p>
</div>
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<p>A <code><a href='https://www.rdocumentation.org/packages/base/topics/data.frame'>data.frame</a></code> with 2,665 observations and 2 variables:</p><dl class='dl-horizontal'>
<dt><code>certe</code></dt><dd><p>Code of microorganism according to Certe MMB</p></dd>
<dt><code>mo</code></dt><dd><p>Code of microorganism in <code>microorganisms</code></p></dd>
<dt><code>mo</code></dt><dd><p>Code of microorganism in <code><a href='microorganisms.html'>microorganisms</a></code></p></dd>
</dl>
<h2 class="hasAnchor" id="see-also"><a class="anchor" href="#see-also"></a>See also</h2>
<div class='dont-index'><p><code>as.mo</code> <code>microorganisms</code></p></div>
<div class='dont-index'><p><code><a href='as.mo.html'>as.mo</a></code> <code><a href='microorganisms.html'>microorganisms</a></code></p></div>
</div>